RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 ADAP2Q9NPF8 381 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 NRIP3Q9NQ35 241 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 RPS10P5Q9NQ39 176 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 MED17Q9NVC6 651 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 FBXL21Q9UKT6 434 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 KCNE3Q9Y6H6 103 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 DOCK4Q8N1I0 1966 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 CHD5Q8TDI0 1954 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 NPIPA5A0A0B4J1W7 369 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 A0A0D9SG52 128 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 POM121BA6NF01 834 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 SNRPGP15A8MWD9 76 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 NPIPA7E9PJI5 369 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 CDC42EP2O14613 210 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 ABCD4O14678 606 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PPM1DO15297 605 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 YKT6O15498 198 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 HPP00738 406 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 IGHA1P01876 353 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 IFNA4P05014 189 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 NPIPA8P0DM63 369 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 SRMP19623 302 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PSMA3P25788 255 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PSMB5P28074 263 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 MPIP34949 423 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 TRHRP34981 398 aaPredicted RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 H2BFSP57053 126 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 ACTC1P68032 377 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 ACTA1P68133 377 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 ADAM8P78325 824 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 SHC2P98077 582 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PON3Q15166 354 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 SHHQ15465 462 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 C9orf152Q5JTZ5 239 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 GLT8D1Q68CQ7 371 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 CORO6Q6QEF8 472 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 CD300LDQ6UXZ3 194 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 ZNF676Q8N7Q3 588 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 WDSUB1Q8N9V3 476 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 VN1R2Q8NFZ6 395 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 OR1J4Q8NGS1 313 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 TSEN15Q8WW01 171 aaKnown RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PTDSS2Q9BVG9 487 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 SARGQ9BW04 601 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 LMAN2LQ9H0V9 348 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 ZCCHC4Q9H5U6 513 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 CCDC86Q9H6F5 360 aaKnown RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 SIDT1Q9NXL6 827 aaKnown RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 IGLV3-16A0A075B6K0 115 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 TMEM218A2RU14 115 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 HMSDA8MTL9 139 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 FCMRO60667 390 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 HPGDP15428 266 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 MGMTP16455 207 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 NT5EP21589 574 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 NFYBP25208 207 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 AK4P27144 223 aaPredicted RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PTGFRP43088 359 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 SIRPAP78324 504 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 BTN3A2P78410 334 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 FOXK2Q01167 660 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 BDH1Q02338 343 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 C2orf68Q2NKX9 166 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PARGQ86W56 976 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 ZNF615Q8N8J6 731 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 OR4C16Q8NGL9 310 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 OR6S1Q8NH40 331 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PFN4Q8NHR9 129 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 AHCYL2Q96HN2 611 aaKnown RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 WDR77Q9BQA1 342 aaPredicted RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 LGR4Q9BXB1 951 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 ENKD1Q9H0I2 346 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 EPHX3Q9H6B9 360 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 CHMP1AQ9HD42 196 aaPredicted RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 MEPEQ9NQ76 525 aaPredicted RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 NPDC1Q9NQX5 325 aaPredicted RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 MED9Q9NWA0 146 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 SOHLH2Q9NX45 425 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 CALML5Q9NZT1 146 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 EXOGQ9Y2C4 368 aaKnown RBP6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 MED31Q9Y3C7 131 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PLEKHM1Q9Y4G2 1056 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 PIAS3Q9Y6X2 628 aa6.82□□□□□ -1.32
SYNPO2-203ENST00000434046 A0A0B4J2A0 478 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 CXorf51AA0A1B0GTR3 108 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 SERTM1A2A2V5 107 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 ELOA3DA6NLF2 546 aaPredicted RBP6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 PLPP2O43688 288 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 TMPRSS11DO60235 418 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 GALR3O60755 368 aaPredicted RBP6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 ADAM11O75078 769 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 NDUFS6O75380 124 aaKnown RBP6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 SLC25A12O75746 678 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 AQP8O94778 261 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 NDUFB6O95139 128 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 DCNP07585 359 aaKnown RBP6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 VSIG10L2P0DP72 767 aa6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 NR0B1P51843 470 aaKnown RBP6.81□□□□□ -1.32
SYNPO2-203ENST00000434046 EPHA4P54764 986 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms