RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TRIM8Q9BZR9 551 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 FBRSL1Q9HCM7 1045 aaKnown RBP3.47□□□□□ -1.85
SHPRH-205ENST00000433355 MMP25Q9NPA2 562 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 PADI1Q9ULC6 663 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 A4GNTQ9UNA3 340 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 EXOGQ9Y2C4 368 aaKnown RBP3.47□□□□□ -1.85
SHPRH-205ENST00000433355 V9GYQ6 96 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 LOC100289279A0A1B0GTE1 492 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 PEX12O00623 359 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 DIRAS1O95057 198 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 SBK2P0C263 348 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 NCK1P16333 377 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 TAGLNQ01995 201 aaKnown RBP3.47□□□□□ -1.85
SHPRH-205ENST00000433355 NAAAQ02083 359 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 PUDPQ08623 228 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF266Q14584 549 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 IL34Q6ZMJ4 242 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 SLC16A14Q7RTX9 510 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 FAM71E2Q8N5Q1 922 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 WDR31Q8NA23 367 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 OR9K2Q8NGE7 335 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 CUTCQ9NTM9 273 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 DNAJB11Q9UBS4 358 aa3.47□□□□□ -1.85
SHPRH-205ENST00000433355 NOTCH4Q99466 2003 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 TVP23AA6NH52 213 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 PRR19A6NJB7 356 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 MT-CO1P00395 513 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 S100A8P05109 93 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 NUDT7P0C024 238 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 ALDH3B1P43353 468 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 PSMA6P60900 246 aaKnown RBP3.46□□□□□ -1.85
SHPRH-205ENST00000433355 PIN1Q13526 163 aaPredicted RBP3.46□□□□□ -1.85
SHPRH-205ENST00000433355 AANATQ16613 207 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 ZIK1Q3SY52 487 aaPredicted RBP3.46□□□□□ -1.85
SHPRH-205ENST00000433355 CNIH2Q6PI25 160 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 PDZD9Q8IXQ8 264 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 RNF217Q8TC41 542 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 GPR152Q8TDT2 470 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 SAT2Q96F10 170 aaPredicted RBP3.46□□□□□ -1.85
SHPRH-205ENST00000433355 HIST1H2AAQ96QV6 131 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 APOOQ9BUR5 198 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 TAAR2Q9P1P5 351 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 MTCH2Q9Y6C9 303 aa3.46□□□□□ -1.85
SHPRH-205ENST00000433355 IFITM5A6NNB3 132 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 XRCC2O43543 280 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 CSF2P04141 144 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 MTCP1P56278 107 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 SELENOVP59797 346 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM207Q6UWW9 146 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 CPOQ8IVL8 374 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF679Q8IYX0 411 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 TCEANCQ8N8B7 351 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 OR5J2Q8NH18 312 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 HMGB4Q8WW32 186 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 ARL11Q969Q4 196 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 RNF31Q96EP0 1072 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 SPHK1Q9NYA1 384 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 MCTS1Q9ULC4 181 aaKnown RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 MMP24Q9Y5R2 645 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 NUP210LQ5VU65 1888 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 FAM230AA0A1W2PPH8 454 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 SLC22A23A1A5C7 686 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 UMAD1C9J7I0 102 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 XRCC3O43542 346 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 WBP4O75554 376 aaKnown RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 HCKP08631 526 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF8P17098 575 aaPredicted RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 GABRB1P18505 474 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 HSD11B1P28845 292 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 HBG1P69891 147 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 HBG2P69892 147 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 CSTF1Q05048 431 aaKnown RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 MFGE8Q08431 387 aaPredicted RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 BTN2A1Q7KYR7 527 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 PARP16Q8N5Y8 322 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 ZDHHC22Q8N966 263 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 GJC3Q8NFK1 279 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 TERB2Q8NHR7 220 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 ZFYVE19Q96K21 471 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 ORAI3Q9BRQ5 295 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 RNF38Q9H0F5 515 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 OR10A5Q9H207 317 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 OR10A2Q9H208 303 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 MARCH7Q9H992 704 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 GKN1Q9NS71 199 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 TXNL4BQ9NX01 149 aaKnown RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 TVP23BQ9NYZ1 205 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 PCDHGA1Q9Y5H4 931 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 MUC22E2RYF6 1773 aaPredicted RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 AQP7P3A6NL99 342 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 SULT2B1O00204 365 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 GAPDHP04406 335 aaKnown RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 COX5BP10606 129 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 GDI1P31150 447 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 GALK1P51570 392 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 PLP2Q04941 152 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 FAPQ12884 760 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 MEP1AQ16819 746 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 TBC1D25Q3MII6 688 aa3.46□□□□□ -1.86
SHPRH-205ENST00000433355 ABCA11PQ4W5N1 156 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms