RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SPHK1Q9NYA1 384 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF223Q9UK11 482 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 DUXAA6NLW8 204 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF749O43361 778 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 S100A6P06703 90 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 OR4E1P0C645 316 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 OR8G3PP0DMU2 310 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC2A5P22732 501 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 BCL6P41182 706 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 EFNB2P52799 333 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ARFIP1P53367 373 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 MRPS10P82664 201 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 RBM39Q14498 530 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 DND1Q8IYX4 353 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 GTPBP8Q8N3Z3 284 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ZSCAN1Q8NBB4 408 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 TMIEQ8NEW7 156 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 TINAGL1Q9GZM7 467 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 DPEP2Q9H4A9 486 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 GPN3Q9UHW5 284 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 MKL2Q9ULH7 1088 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 HTTP42858 3142 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 RAD1O60671 282 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 GLSO94925 669 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 ACAA1P09110 424 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 AGTR1P30556 359 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 PTGFRP43088 359 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 POU4F2Q12837 409 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 SMAD2Q15796 467 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 DEFB115Q30KQ5 88 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 JMJD6Q6NYC1 403 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 SLC48A1Q6P1K1 146 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 LINC01555Q8NAE3 123 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 CAMKVQ8NCB2 501 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 TRIM43Q96BQ3 446 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 Q96M85 177 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 SLC46A2Q9BY10 475 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 ULBP3Q9BZM4 244 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 H7C417 338 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 SSX5O60225 188 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 AKAIN1P0CW23 69 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 CSF2RBP32927 897 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 AQP2P41181 271 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 LY6G5CQ5SRR4 150 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF511Q8NB15 262 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 IGSF21Q96ID5 467 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 PRSS16Q9NQE7 514 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 MBD2Q9UBB5 411 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 MTFP1Q9UDX5 166 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 ADAM29Q9UKF5 820 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 ABT1Q9ULW3 272 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 GTF2A1LQ9UNN4 478 aa10.58□□□□□ -0.72
HMGCS1-202ENST00000433297 CXCL14O95715 111 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 CSF1P09603 554 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ADRA2CP18825 462 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ITGB8P26012 769 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 SLC6A6P31641 620 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 SMCO1Q147U7 214 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF658BQ4V348 819 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 GLT8D1Q68CQ7 371 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 MTSS1LQ765P7 747 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 OR6N1Q8NGY5 312 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 MOAP1Q96BY2 351 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 MS4A6EQ96DS6 147 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 SDF2Q99470 211 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 TMEM27Q9HBJ8 222 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 IKZF2Q9UKS7 526 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ALPK2Q86TB3 2170 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 TMEM82A0PJX8 343 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 EIF4E2O60573 245 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 CLEC3AO75596 197 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ACTL6AO96019 429 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 C6P13671 934 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 MAPK3P27361 379 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 AKR1C3P42330 323 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 RPS27P42677 84 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 CAPZA1P52907 286 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ATP1B3P54709 279 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 HTRA4P83105 476 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 NKPD1Q17RQ9 610 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PLEKHN1Q494U1 663 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 TRMT12Q53H54 448 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PRAMEF8Q5VWM4 474 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PRAMEF7Q5VXH5 474 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 MFSD12Q6NUT3 480 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 STEAP1BQ6NZ63 245 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ABHD17CQ6PCB6 329 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 OR1J2Q8NGS2 313 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 OR10R2Q8NGX6 335 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 OR5K2Q8NHB8 316 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PPP1R1CQ8WVI7 109 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 C3orf49Q96BT1 292 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 LMLNQ96KR4 655 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 CMTM3Q96MX0 182 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 TSSK2Q96PF2 358 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 LMF1Q96S06 567 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PRDM7Q9NQW5 492 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 DHCR7Q9UBM7 475 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 DNAH14Q0VDD8 3507 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms