RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 C20orf85Q9H1P6 137 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 NANSQ9NR45 359 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF275Q9NSD4 429 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 UBQLN1Q9UMX0 589 aaKnown RBP2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 PLLPQ9Y342 182 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 IFT52Q9Y366 437 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 ADAMTS9Q9P2N4 1935 aa2.26□□□□□ -2.05
HMGB1P27-201ENST00000431429 RAB3GAP2Q9H2M9 1393 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 THSD7BQ9C0I4 1608 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 CDHR2Q9BYE9 1310 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PPIAL4EA0A075B759 164 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 IGHV1OR21-1A0A087WYE8 117 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 A0A1B0GVL5 298 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 TUBAL3A6NHL2 446 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 KRTAP4-16G5E9R7 235 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 ATP5LO75964 103 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR8U8P0C7N1 319 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 UQCRFS1P1P0C7P4 283 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PPIAL4FP0DN26 164 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 ATP1B2P14415 290 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 GNA11P29992 359 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 CALCRP30988 508 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 VHLP40337 213 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 CRYBB2P43320 205 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 SUCLG1P53597 346 aaKnown RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PRMT2P55345 433 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 BIDP55957 195 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 HMGN5P82970 282 aaKnown RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 OGDHQ02218 1023 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCDC173Q0VFZ6 552 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PPIL2Q13356 520 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF239Q16600 458 aaKnown RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 NSUN5P1Q3KNT7 163 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PRAMEF5Q5TYX0 476 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 MARC1Q5VT66 337 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PRAMEF6Q5VXH4 476 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 UQCC3Q6UW78 93 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 GDPD3Q7L5L3 318 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 TAS2R42Q7RTR8 314 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 FBXO16Q8IX29 292 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 RDH10Q8IZV5 341 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 LYG1Q8N1E2 194 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 C6orf223Q8N319 242 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 GPD1LQ8N335 351 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 FBXL16Q8N461 479 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 ATP6V0D2Q8N8Y2 350 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR9K2Q8NGE7 335 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR52H1Q8NGJ2 320 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 AKR7LQ8NHP1 331 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 RAB3IL1Q8TBN0 382 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF564Q8TBZ8 553 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLC2A14Q8TDB8 520 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 ST8SIA1Q92185 356 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 ANKRD9Q96BM1 317 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 TIMD4Q96H15 378 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 MS4A14Q96JA4 679 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PGLYRP4Q96LB8 373 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PLEKHF1Q96S99 279 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCDC77Q9BR77 488 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 FAIM2Q9BWQ8 316 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 SELENOIQ9C0D9 397 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLITRK2Q9H156 845 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 EHD1Q9H4M9 534 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 REEP4Q9H6H4 257 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 SUDS3Q9H7L9 328 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 NHEJ1Q9H9Q4 299 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 POLE4Q9NR33 117 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PRR34Q9NV39 138 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 SEC14L3Q9UDX4 400 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PISDQ9UG56 409 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 SUN2Q9UH99 717 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 CTNNA3Q9UI47 895 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 PEX16Q9Y5Y5 336 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 NPTNQ9Y639 398 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 KIF25-AS1Q9Y6Z4 181 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLIT3O75094 1523 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF318Q5VUA4 2279 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 KNDC1Q76NI1 1749 aa2.25□□□□□ -2.05
HMGB1P27-201ENST00000431429 NOTCH3Q9UM47 2321 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 BTAF1O14981 1849 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 AKAP12Q02952 1782 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 TP53BP1Q12888 1972 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 TCRBV9S1A1TA0A576 114 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZFP92A6NM28 416 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 HAS3O00219 553 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 RGS16O15492 202 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 MED7O43513 233 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 CST1P01037 141 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 CT62P0C5K7 136 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 KRTAP1-4P0C5Y4 121 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 HOXD10P28358 340 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 CD1CP29017 333 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 PRKAR2BP31323 418 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 KIR2DS4P43632 304 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 ATP5IP56385 69 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCNA1P78396 465 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 IGLV3-21P80748 117 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 BCL2L1Q07817 233 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLC10A7Q0GE19 358 aa2.24□□□□□ -2.05
HMGB1P27-201ENST00000431429 BST2Q10589 180 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms