RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 ATF1P18846 271 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 RAB3BP20337 219 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 EDNRAP25101 427 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 MAP2K3P46734 347 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 NANOS3P60323 173 aaKnown RBP12.64□□□□□ -0.39
HOXC4-202ENST00000430889 RNF4P78317 190 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 CBFBQ13951 182 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 IL18Q14116 193 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 NR0B2Q15466 257 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 EEF1A1P5Q5VTE0 462 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 IL20RBQ6UXL0 311 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 OVCH1Q7RTY7 1134 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 ADGRG3Q86Y34 549 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 SCAIQ8N9R8 606 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 DUSP18Q8NEJ0 188 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 OR4D9Q8NGE8 314 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 TRIM63Q969Q1 353 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 SNX18Q96RF0 628 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 MESP1Q9BRJ9 268 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 TBL1XR1Q9BZK7 514 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 MMP28Q9H239 520 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 RXFP3Q9NSD7 469 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 EXTL2Q9UBQ6 330 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 ASCC3Q8N3C0 2202 aaKnown RBP12.64□□□□□ -0.39
HOXC4-202ENST00000430889 A0A0G2JMP0 313 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 TRBV2A0A0J9YWF9 115 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 A0A0X1KG70 313 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 LINC00854A0A1B0GVQ3 168 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 TMEM72A0PK05 275 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 MEIOCA2RUB1 952 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 VSTM2BA6NLU5 285 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 NOTOA8MTQ0 251 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 FAM171A2A8MVW0 826 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 IDSB3KWA1 339 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 ZNF354AO60765 605 aaPredicted RBP12.64□□□□□ -0.39
HOXC4-202ENST00000430889 MT-ATP6P00846 226 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 TFPIP10646 304 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 EPXP11678 715 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 GP1BBP13224 206 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 CXCR1P25024 350 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 RBMS1P29558 406 aaKnown RBP12.64□□□□□ -0.39
HOXC4-202ENST00000430889 PSMB10P40306 273 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 POLR2HP52434 150 aaKnown RBP12.64□□□□□ -0.39
HOXC4-202ENST00000430889 CCL7P80098 99 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 QPRTQ15274 297 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 SGCBQ16585 318 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 NKAIN1Q4KMZ8 207 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 SLC6A19Q695T7 634 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 TSSK4Q6SA08 328 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 KCTD20Q7Z5Y7 419 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 OR6V1Q8N148 313 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 ZNF519Q8TB69 540 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 HAVCR2Q8TDQ0 301 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 GFI1Q99684 422 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 PDCD1LG2Q9BQ51 273 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 WDR77Q9BQA1 342 aaPredicted RBP12.64□□□□□ -0.39
HOXC4-202ENST00000430889 NDEL1Q9GZM8 345 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 RBFOX1Q9NWB1 397 aaKnown RBP12.64□□□□□ -0.39
HOXC4-202ENST00000430889 ANKRD10Q9NXR5 420 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 MRM2Q9UI43 246 aaKnown RBP12.64□□□□□ -0.39
HOXC4-202ENST00000430889 PILRBQ9UKJ0 227 aa12.64□□□□□ -0.39
HOXC4-202ENST00000430889 TMED7-TICAM2A0A0A6YYA0 188 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 IGHV3-20A0A0C4DH32 117 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 IGHV5-10-1A0A0J9YXX1 117 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 TMEM221A6NGB7 291 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 TMEM200CA6NKL6 621 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 FAM25AB3EWG3 89 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 FAM25CB3EWG5 89 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 FAM25GB3EWG6 89 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 SUSD5O60279 629 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 CPNE3O75131 537 aaKnown RBP12.63□□□□□ -0.39
HOXC4-202ENST00000430889 ARL6IP5O75915 188 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 DXOO77932 396 aaKnown RBP12.63□□□□□ -0.39
HOXC4-202ENST00000430889 PAHP00439 452 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 IGHMP01871 453 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 PSKH1P11801 424 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 SF3A2Q15428 464 aaKnown RBP12.63□□□□□ -0.39
HOXC4-202ENST00000430889 TRIQKQ629K1 86 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 SHISA6Q6ZSJ9 500 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 WDR5BQ86VZ2 330 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 NUBPLQ8TB37 319 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 TRMT10AQ8TBZ6 339 aaKnown RBP12.63□□□□□ -0.39
HOXC4-202ENST00000430889 STK35Q8TDR2 534 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 HGDQ93099 445 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 ST6GAL2Q96JF0 529 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 MNTQ99583 582 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 ABRACLQ9P1F3 81 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 GRHPRQ9UBQ7 328 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 TMED7Q9Y3B3 224 aa12.63□□□□□ -0.39
HOXC4-202ENST00000430889 H7C1C5 153 aa12.62□□□□□ -0.39
HOXC4-202ENST00000430889 KHNYNO15037 678 aaKnown RBP12.62□□□□□ -0.39
HOXC4-202ENST00000430889 LYRM1O43325 122 aa12.62□□□□□ -0.39
HOXC4-202ENST00000430889 SIGLEC6O43699 453 aa12.62□□□□□ -0.39
HOXC4-202ENST00000430889 SCO2O43819 266 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms