RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 CRYAAP02489 173 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 CAPN1P07384 714 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 PRSS1P07477 247 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ZCCHC18P0CG32 403 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ERVK-10P10266 1014 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 SLC2A3P11169 496 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ICAM2P13598 275 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 GPR183P32249 361 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ZFP36L2P47974 494 aaKnown RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ALDH3B2P48448 385 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 NPY2RP49146 381 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 STARP49675 285 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 RAP1GDS1P52306 607 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ABCE1P61221 599 aaKnown RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 MAGOHP61326 146 aaKnown RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 PPIAP62937 165 aaKnown RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 UBE2IP63279 158 aaKnown RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TNNC1P63316 161 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 CSNK2BP67870 215 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 SPIBQ01892 262 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 C2orf54Q08AI8 447 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 CHIT1Q13231 466 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ZBTB6Q15916 424 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TATDN3Q17R31 274 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 LRRC36Q1X8D7 754 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ISXQ2M1V0 245 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TRMT5Q32P41 509 aaKnown RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ADPRMQ3LIE5 342 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 GTDC1Q4AE62 458 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 NADK2Q4G0N4 442 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 FAM76BQ5HYJ3 339 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 LDLRAP1Q5SW96 308 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 AADACL4Q5VUY2 407 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ZNF324BQ6AW86 544 aaPredicted RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 PRMT9Q6P2P2 845 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 UGT2A3Q6UWM9 527 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 CLEC18BQ6UXF7 455 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 IZUMO2Q6UXV1 221 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 Q6ZRG5 221 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TPGS1Q6ZTW0 290 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ARPINQ7Z6K5 226 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 BBS7Q8IWZ6 715 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 KIF2BQ8N4N8 673 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 LRRC52Q8N7C0 313 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 DNAAF3Q8N9W5 541 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 STEAP2Q8NFT2 490 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 OR5M9Q8NGP3 310 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 OR2T34Q8NGX1 318 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 OR6F1Q8NGZ6 308 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 OR4C6Q8NH72 309 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 MYLPFQ96A32 169 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 MAGOHBQ96A72 148 aaKnown RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 PNPLA2Q96AD5 504 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TAMM41Q96BW9 452 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 SLC25A36Q96CQ1 311 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TMEM80Q96HE8 168 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 SERAC1Q96JX3 654 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TTC25Q96NG3 672 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 DOK1Q99704 481 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 OMDQ99983 421 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TBC1D10AQ9BXI6 508 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 MMP28Q9H239 520 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 SIAEQ9HAT2 523 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 UBE2TQ9NPD8 197 aaPredicted RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TIGARQ9NQ88 270 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 YAE1D1Q9NRH1 226 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 NDE1Q9NXR1 346 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 NLGN3Q9NZ94 848 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 TMEM9Q9P0T7 183 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 RAB26Q9ULW5 256 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 CLEC4AQ9UMR7 237 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 SNX6Q9UNH7 406 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 EIF3LQ9Y262 564 aaKnown RBP3.49□□□□□ -1.85
HMGB3-203ENST00000430118 CBY1Q9Y3M2 126 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 ATG4BQ9Y4P1 393 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 RNF215Q9Y6U7 377 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 CSMD1Q96PZ7 3565 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 BOD1L1Q8NFC6 3051 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 DOPEY2Q9Y3R5 2298 aa3.49□□□□□ -1.85
HMGB3-203ENST00000430118 F8VP50 259 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 TOR1AO14656 332 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 RIPK2O43353 540 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 COCHO43405 550 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SDC3O75056 442 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 PSIP1O75475 530 aaKnown RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 NGFP01138 241 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 GFAPP14136 432 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ANOS1P23352 680 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 F8A1P23610 371 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 CYLC1P35663 651 aaPredicted RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ATP5C1P36542 298 aaKnown RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SOX3P41225 446 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 CDK16Q00536 496 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 KLRB1Q12918 225 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SELENBP1Q13228 472 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 NAB1Q13506 487 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ENPP2Q13822 863 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 KLF5Q13887 457 aaPredicted RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 NCF4Q15080 339 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 PDK3Q15120 406 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms