RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 CLLU1Q5K131 121 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 HAGHLQ6PII5 290 aaPredicted RBP12.63□□□□□ -0.39
SGMS1-203ENST00000429490 TMPRSS9Q7Z410 1059 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 SPRED2Q7Z698 418 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 KCNJ15Q99712 375 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 SYT4Q9H2B2 425 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 SCN8AQ9UQD0 1980 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 NAP1L6A6NFF2 107 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 ZNF705EA8MWA4 302 aaPredicted RBP12.62□□□□□ -0.39
SGMS1-203ENST00000429490 SOX1O00570 391 aaPredicted RBP12.62□□□□□ -0.39
SGMS1-203ENST00000429490 ZFPL1O95159 310 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 GJA4P35212 333 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 TAS2R20P59543 309 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 HACD4Q5VWC8 232 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 GPR139Q6DWJ6 353 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 TMUB2Q71RG4 321 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 PRSS42Q7Z5A4 293 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 CCDC36Q8IYA8 594 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 ZNF101Q8IZC7 436 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 GPER1Q99527 375 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 POTEKPQ9BYX7 375 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 GSKIPQ9P0R6 139 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 SCML1Q9UN30 329 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 USP34Q70CQ2 3546 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 DCNP07585 359 aaKnown RBP12.62□□□□□ -0.39
SGMS1-203ENST00000429490 UGT2B7P16662 529 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 SPOCK1Q08629 439 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 TANGO2Q6ICL3 276 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 OR10K2Q6IF99 312 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 GPR148Q8TDV2 347 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 RBP7Q96R05 134 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 KCNK15Q9H427 330 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 CA10Q9NS85 328 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 MRPS18AQ9NVS2 196 aaKnown RBP12.62□□□□□ -0.39
SGMS1-203ENST00000429490 SLC6A5Q9Y345 797 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 PRSS38A1L453 326 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 ZNF823P16415 610 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 MC2RQ01718 297 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 BDH1Q02338 343 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 TMEM52BQ4KMG9 183 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 CCDC157Q569K6 752 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 FAM122CQ6P4D5 195 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 TRAF4Q9BUZ4 470 aaPredicted RBP12.62□□□□□ -0.39
SGMS1-203ENST00000429490 PRTFDC1Q9NRG1 225 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 PCDHB16Q9NRJ7 776 aa12.62□□□□□ -0.39
SGMS1-203ENST00000429490 MRTO4Q9UKD2 239 aaKnown RBP12.62□□□□□ -0.39
SGMS1-203ENST00000429490 MRPS2Q9Y399 296 aaKnown RBP12.62□□□□□ -0.39
SGMS1-203ENST00000429490 FITM1A5D6W6 292 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 AGPAT2O15120 278 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 CDC40O60508 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
SGMS1-203ENST00000429490 GPANK1O95872 356 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 CXCL10P02778 98 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 ZNF28P17035 718 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 ACHEP22303 614 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 FRKP42685 505 aaPredicted RBP12.61□□□□□ -0.39
SGMS1-203ENST00000429490 PRKXP51817 358 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 RBMS2Q15434 407 aaKnown RBP12.61□□□□□ -0.39
SGMS1-203ENST00000429490 RAB11BQ15907 218 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 TUSC1Q2TAM9 212 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 KIRREL2Q6UWL6 708 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 UNQ6126/PRO20091Q6UXV3 157 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 LRRC69Q6ZNQ3 347 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 SLC35F3Q8IY50 421 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 MEPEQ9NQ76 525 aaPredicted RBP12.61□□□□□ -0.39
SGMS1-203ENST00000429490 LRIT1Q9P2V4 623 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 MED12Q93074 2177 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 BHLHE40O14503 412 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 PPM1BO75688 479 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 EGFP01133 1207 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 THY1P04216 161 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 SPI1P17947 270 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 ITGA3P26006 1051 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 LUMP51884 338 aaPredicted RBP12.61□□□□□ -0.39
SGMS1-203ENST00000429490 MELKQ14680 651 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 MLC1Q15049 377 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 SLC36A2Q495M3 483 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 ZNF350Q9GZX5 532 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 DHDHQ9UQ10 334 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 P2RX6O15547 441 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 TBX19O60806 448 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 FARS2O95363 451 aaKnown RBP12.61□□□□□ -0.39
SGMS1-203ENST00000429490 TMIGD3P0DMS9 266 aaPredicted RBP12.61□□□□□ -0.39
SGMS1-203ENST00000429490 IFNGR1P15260 489 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 C5AR1P21730 350 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 CD34P28906 385 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 POU3F4P49335 361 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 P2RX1P51575 399 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 Q499Y3 187 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 PRAMEF8Q5VWM4 474 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 PRAMEF7Q5VXH5 474 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 TMEM88Q6PEY1 159 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 ZNF584Q8IVC4 421 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 DEFB119Q8N690 84 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 C15orf40Q8WUR7 153 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 ADOQ96SZ5 270 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 TBL1XR1Q9BZK7 514 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 ELOVL3Q9HB03 270 aa12.61□□□□□ -0.39
SGMS1-203ENST00000429490 CGGBP1Q9UFW8 167 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms