RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 AMY2BP19961 511 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 MAGEA12P43365 314 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 VRK3Q8IV63 474 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 APLFQ8IW19 511 aaPredicted RBP6.64□□□□□ -1.35
CNOT4-206ENST00000428680 OR8J3Q8NGG0 315 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 OR5W2Q8NH69 310 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 CNOT9Q92600 299 aaKnown RBP6.64□□□□□ -1.35
CNOT4-206ENST00000428680 PIK3IP1Q96FE7 263 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 NODALQ96S42 347 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 TMED9Q9BVK6 235 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 SARGQ9BW04 601 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 TESQ9UGI8 421 aaKnown RBP6.64□□□□□ -1.35
CNOT4-206ENST00000428680 FBXL3Q9UKT7 428 aa6.64□□□□□ -1.35
CNOT4-206ENST00000428680 PCDH15Q96QU1 1955 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 OR7C1O76099 320 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 AKR7A3O95154 331 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 IL1AP01583 271 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 SERPINA5P05154 406 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 NPPBP16860 134 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 SDC1P18827 310 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 FPR2P25090 351 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 SNCAP37840 140 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 ADARP55265 1226 aaKnown RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 PFN3P60673 137 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 PITPNAQ00169 270 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 PIN1Q13526 163 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 GALEQ14376 348 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 TMEM69Q5SWH9 247 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 FAM69AQ5T7M9 428 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 TMEM244Q5VVB8 128 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 AWAT2Q6E213 333 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 ANKRD16Q6P6B7 361 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 FAM57BQ71RH2 274 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 H1FNTQ75WM6 255 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 FOXRED2Q8IWF2 684 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 LRRC17Q8N6Y2 441 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 BORCS5Q969J3 196 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 NT5C3BQ969T7 300 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 KIAA1456Q9P272 454 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 COPZ2Q9P299 210 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 TRAPPC2LQ9UL33 140 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 IGHV5-10-1A0A0J9YXX1 117 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 TMEM269A0A1B0GVZ9 245 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 SMAD7O15105 426 aaKnown RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 CDC14BO60729 498 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 TNFRSF21O75509 655 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 GSTT1P30711 240 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 DRD3P35462 400 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 SRP9P49458 86 aaKnown RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 ZXDBP98169 803 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 PMPCAQ10713 525 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 PLA2G7Q13093 441 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 TCEAL1Q15170 157 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 CCSMST1Q4G0I0 132 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 HSD17B12Q53GQ0 312 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 RPS26P11Q5JNZ5 115 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 CTSL3PQ5NE16 218 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 C1orf140Q5VVS0 124 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 FAM83HQ6ZRV2 1179 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 GLB1L2Q8IW92 636 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 CMTM1Q8IZ96 169 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 BPIFB2Q8N4F0 458 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 DTX3Q8N9I9 347 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 MAL2Q969L2 176 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 GNRHR2Q96P88 292 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 AMBRA1Q9C0C7 1298 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 SAP130Q9H0E3 1048 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 COMMD3Q9UBI1 195 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 TBC1D24Q9ULP9 559 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 OR6C70A6NIJ9 312 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 C16orf97H3BN30 126 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 LRRTM2O43300 516 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 SMPD2O60906 423 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 ENTPD6O75354 484 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 EEDO75530 441 aaKnown RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 RGS11O94810 467 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 IFNA2P01563 188 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 HOXD4P09016 255 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 CELP19835 753 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 EPHA1P21709 976 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 CHMP24386 653 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 ATP5J2P56134 94 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 DSCR4P56555 118 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 DAG1Q14118 895 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 RNPS1Q15287 305 aaKnown RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 LIPHQ8WWY8 451 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 S100A16Q96FQ6 103 aaKnown RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 SAMD8Q96LT4 415 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 KCTD7Q96MP8 289 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 VN1R1Q9GZP7 353 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 BARX1Q9HBU1 254 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-206ENST00000428680 TREX1Q9NSU2 369 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 DNAJC15Q9Y5T4 150 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 PTGDR2Q9Y5Y4 395 aa6.63□□□□□ -1.35
CNOT4-206ENST00000428680 LRIT2A6NDA9 550 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CCDC182A6NF36 153 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 B4DXG7 233 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 DOK2O60496 412 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CRTAPO75718 401 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 MPIG6BO95866 241 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms