RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 BCHEP06276 602 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 ETV4P43268 484 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 COMPP49747 757 aaPredicted RBP15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 UFM1P61960 85 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 LARS2Q15031 903 aaKnown RBP15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 MAPK11Q15759 364 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 MSMPQ1L6U9 139 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 RNF220Q5VTB9 566 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 SERPINA11Q86U17 422 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 CCDC36Q8IYA8 594 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 PIK3C3Q8NEB9 887 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 KTI12Q96EK9 354 aaPredicted RBP15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 MS4A3Q96HJ5 214 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 OXGR1Q96P68 337 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 LRRC37BQ96QE4 947 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 OR52E6Q96RD3 313 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 SYT3Q9BQG1 590 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 PTDSS2Q9BVG9 487 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 NUF2Q9BZD4 464 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 CACYBPQ9HB71 228 aaKnown RBP15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 TREM2Q9NZC2 230 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 CALML5Q9NZT1 146 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 RAP2CQ9Y3L5 183 aa15.76■□□□□ 0.11
UPK3BP1-201ENST00000428678 DSPPQ9NZW4 1301 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF99A8MXY4 864 aaPredicted RBP15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 HLA-HP01893 362 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 TFP02787 698 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 HPXP02790 462 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 CD79AP11912 226 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 COL8A2P25067 703 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 ALDH3B1P43353 468 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 EVX1P49640 407 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 RPL14P50914 215 aaKnown RBP15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 CRISP3P54108 245 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 SLC9B1Q4ZJI4 515 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 PEG10Q86TG7 708 aaKnown RBP15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 OR51F2Q8NH61 342 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 RDH5Q92781 318 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 OR2M2Q96R28 347 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 MS4A5Q9H3V2 200 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 B3GAT1Q9P2W7 334 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 PCDHB10Q9UN67 800 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF232Q9UNY5 417 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 NOX1Q9Y5S8 564 aa15.75■□□□□ 0.11
UPK3BP1-201ENST00000428678 M0R3G1 203 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 WNT9BO14905 357 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 PPIHO43447 177 aaKnown RBP15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 AKAP8O43823 692 aaKnown RBP15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 TYROBPO43914 113 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 ETFAP13804 333 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 ACHEP22303 614 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 IL12AP29459 219 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 CRATP43155 626 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 HOXC5Q00444 222 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 EGR4Q05215 589 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 LRRC74AQ0VAA2 488 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 MAD2L1BPQ15013 274 aaPredicted RBP15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 TRMT5Q32P41 509 aaKnown RBP15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 RPS26P11Q5JNZ5 115 aaPredicted RBP15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 GKAP1Q5VSY0 366 aaPredicted RBP15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 CARD17Q5XLA6 110 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 REP15Q6BDI9 236 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 FAHD2BQ6P2I3 314 aaPredicted RBP15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 FAM216AQ8WUB2 273 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 FAHD2AQ96GK7 314 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 SPATA9Q9BWV2 254 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 C20orf27Q9GZN8 174 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 RACGAP1Q9H0H5 632 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 ARMC7Q9H6L4 198 aa15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.74■□□□□ 0.11
UPK3BP1-201ENST00000428678 TMEM89A2RUT3 159 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 TRIM77I1YAP6 450 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 M0R082 166 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 RFXANKO14593 260 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 AIM2O14862 343 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 KCNAB3O43448 404 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 ALDOCP09972 364 aaKnown RBP15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 GAAP10253 952 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 EPHA1P21709 976 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 SEC24CP53992 1094 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 HILS1P60008 231 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 PIGFQ07326 219 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 GSG1Q2KHT4 349 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 TMEM123Q8N131 208 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF417Q8TAU3 575 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 SLC38A5Q8WUX1 472 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF587Q96SQ5 575 aaPredicted RBP15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 SORT1Q99523 831 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZBTB18Q99592 522 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 RBM4Q9BWF3 364 aaKnown RBP15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF275Q9NSD4 429 aaPredicted RBP15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 AIG1Q9NVV5 245 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 B3GNT2Q9NY97 397 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 RPS6KB2Q9UBS0 482 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 FZR1Q9UM11 496 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 CHST2Q9Y4C5 530 aa15.73■□□□□ 0.11
UPK3BP1-201ENST00000428678 PNPP00491 289 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 CBLP22681 906 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 GLRXP35754 106 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 SLC1A6P48664 564 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms