RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 HOXB5P09067 269 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 ZNF728P0DKX0 622 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 MGST1P10620 155 aaKnown RBP8.3□□□□□ -1.08
CTNND1-208ENST00000428599 IRS1P35568 1242 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 RGRP47804 291 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 TNK1Q13470 666 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 KCNJ8Q15842 424 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 PROX2Q3B8N5 592 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 UBE2NLQ5JXB2 153 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 FAM199XQ6PEV8 388 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-208ENST00000428599 ANKRD13BQ86YJ7 626 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 APH1AQ96BI3 265 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 SLC39A13Q96H72 371 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 ZNF583Q96ND8 569 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 SAV1Q9H4B6 383 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-208ENST00000428599 ADAM29Q9UKF5 820 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 CA5BQ9Y2D0 317 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 LAMB1P07942 1786 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 SLC22A23A1A5C7 686 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 GABRA4P48169 554 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 TNFRSF17Q02223 184 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 ZNF74Q16587 644 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 B3GLCTQ6Y288 498 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 SERPINA11Q86U17 422 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 CATSPERDQ86XM0 798 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 CISD2Q8N5K1 135 aaKnown RBP8.3□□□□□ -1.08
CTNND1-208ENST00000428599 C15orf54Q8N8G6 183 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 ZNF454Q8N9F8 522 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 OR5K2Q8NHB8 316 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 TMEM163Q8TC26 289 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 THOC3Q96J01 351 aaKnown RBP8.3□□□□□ -1.08
CTNND1-208ENST00000428599 THAP7Q9BT49 309 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-208ENST00000428599 MOKQ9UQ07 419 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 MMACHCQ9Y4U1 282 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 USP54Q70EL1 1684 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 KIAA0100Q14667 2235 aaKnown RBP8.3□□□□□ -1.08
CTNND1-208ENST00000428599 PMS2P1A4D2B8 440 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 G3V3Y1 287 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 ZNF593O00488 134 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-208ENST00000428599 PGGHGQ32M88 737 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 PLAG1Q6DJT9 500 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 LETMD1Q6P1Q0 360 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 VRK2Q86Y07 508 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 LINC01465Q8N7H1 131 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 BTF3L4Q96K17 158 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 MBOAT4Q96T53 435 aa8.3□□□□□ -1.08
CTNND1-208ENST00000428599 TRAV36DV7A0A075B6V5 113 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 PTTG1O95997 202 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 HTR2BP41595 481 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 ETV4P43268 484 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 TLE4Q04727 773 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 SERPINA12Q8IW75 414 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 PIANPQ8IYJ0 282 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 SECTM1Q8WVN6 248 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 IP6K3Q96PC2 410 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 ZNF281Q9Y2X9 895 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 PCDHGA7Q9Y5G6 932 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 STMND1H3BQB6 276 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 F10P00742 488 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 ZNF140P52738 457 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 RPL22L1Q6P5R6 122 aaKnown RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 PAPD4Q6PIY7 484 aaKnown RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 KANSL1Q7Z3B3 1105 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 TMEM185AQ8NFB2 350 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 LCORQ96JN0 433 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 SMIM14Q96QK8 99 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 INSM2Q96T92 566 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 CTRCQ99895 268 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 PPA2Q9H2U2 334 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 LHX3Q9UBR4 397 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 ZNF705GA8MUZ8 300 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 LGALS8O00214 317 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 SOCS6O14544 535 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 IL2RAP01589 272 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 F13BP05160 661 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 GYPBP06028 91 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 RAB40ALP0C0E4 278 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 RACK1P63244 317 aaKnown RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 NKAIN2Q5VXU1 208 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 TRNP1Q6NT89 227 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 RNF113BQ8IZP6 322 aaKnown RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 RAB40AQ8WXH6 277 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 IL37Q9NZH6 218 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 TMED7-TICAM2A0A0A6YYA0 188 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 TMEM212A6NML5 194 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 HLA-AP01891 365 aaKnown RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 SERPINF1P36955 418 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 BMXP51813 675 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 GNB1P62873 340 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 MRPS34P82930 218 aaKnown RBP8.29□□□□□ -1.08
CTNND1-208ENST00000428599 HOXC5Q00444 222 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 TLE1Q04724 770 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 EDDM3AQ14507 147 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 GLB1L2Q8IW92 636 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 OR13J1Q8NGT2 312 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 PAQR8Q8TEZ7 354 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 DEDD2Q8WXF8 326 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 OR1E3Q8WZA6 343 aa8.29□□□□□ -1.08
CTNND1-208ENST00000428599 HRASLS5Q96KN8 279 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms