RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ZBED6CLQ96FA7 236 aaPredicted RBP4.54□□□□□ -1.68
LINC00458-202ENST00000427299 RRNAD1Q96FB5 475 aaKnown RBP4.54□□□□□ -1.68
LINC00458-202ENST00000427299 OTUB1Q96FW1 271 aaPredicted RBP4.54□□□□□ -1.68
LINC00458-202ENST00000427299 TMEM80Q96HE8 168 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 SLC38A2Q96QD8 506 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 SMIM14Q96QK8 99 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 MTERF1Q99551 399 aaKnown RBP4.54□□□□□ -1.68
LINC00458-202ENST00000427299 MGLLQ99685 303 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 P2RY13Q9BPV8 354 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 BBS2Q9BXC9 721 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 UCK2Q9BZX2 261 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 ROGDIQ9GZN7 287 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 HOXD1Q9GZZ0 328 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 PCBD2Q9H0N5 130 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 DPEP2Q9H4A9 486 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 SLA2Q9H6Q3 261 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 ANKRA2Q9H9E1 313 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 PELI2Q9HAT8 420 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 A4GALTQ9NPC4 353 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 EXOSC4Q9NPD3 245 aaKnown RBP4.54□□□□□ -1.68
LINC00458-202ENST00000427299 ISYNA1Q9NPH2 558 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 MS4A12Q9NXJ0 267 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 GPR83Q9NYM4 423 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 COQ3Q9NZJ6 369 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 PLAGL1Q9UM63 463 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 KLHL20Q9Y2M5 609 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 GSTK1Q9Y2Q3 226 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 EXOSC1Q9Y3B2 195 aaKnown RBP4.54□□□□□ -1.68
LINC00458-202ENST00000427299 ASB4Q9Y574 426 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 SCN2AQ99250 2005 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 DNAH12Q6ZR08 3092 aa4.54□□□□□ -1.68
LINC00458-202ENST00000427299 MDC1Q14676 2089 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 COL4A2P08572 1712 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 A0A1W2PRB8 838 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 TMEM129A0AVI4 362 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SLC5A10A0PJK1 596 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 LRRC72A6NJI9 287 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 CENPXA8MT69 81 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 KDM4EB2RXH2 506 aaPredicted RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 H3BN98 237 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 RTCAO00442 366 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SLC30A4O14863 429 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 TIMM23O14925 209 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 KMOO15229 486 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ARHGEF9O43307 516 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 PI15O43692 258 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 OR10H3O60404 316 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 CSO75390 466 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 NME6O75414 186 aaPredicted RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 KCNK2O95069 426 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 PRAMEF12O95522 483 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 C6orf47O95873 294 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 CXCL10P02778 98 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 OPN1SWP03999 348 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 H1F0P07305 194 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 STSP08842 583 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 THEGLP0DJG4 465 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 PRKAR1AP10644 381 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 MMP9P14780 707 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 CD22P20273 847 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 IDSP22304 550 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ELAVL4P26378 380 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 GABRR2P28476 465 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 C21orf33P30042 268 aaPredicted RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 NTSP30990 170 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 MMP12P39900 470 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 BDKRB1P46663 353 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SLC9A3P48764 834 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 INPP1P49441 399 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 XKP51811 444 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SMSP52788 366 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 CRISP3P54108 245 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 WNT4P56705 351 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 TRA2BP62995 288 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 HBA1P69905 142 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 IFITM3Q01628 133 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 C17orf67Q0P5P2 114 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 RAB40BQ12829 278 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 COX10Q12887 443 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 GPR50Q13585 617 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ARHGAP19Q14CB8 494 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 PTGES3Q15185 160 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 QPRTQ15274 297 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ANGPT1Q15389 498 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SF3B4Q15427 424 aaKnown RBP eCLIP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SPHARQ15513 63 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 LRRC26Q2I0M4 334 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ATAD3CQ5T2N8 411 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 LCN1P1Q5VSP4 162 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 PRAMEF8Q5VWM4 474 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 PRAMEF7Q5VXH5 474 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SAXO2Q658L1 398 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 C12orf73Q69YU5 71 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 FAM71E1Q6IPT2 247 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 METAP1DQ6UB28 335 aaPredicted RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SLC36A4Q6YBV0 504 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 HSDL2Q6YN16 418 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ERN2Q76MJ5 926 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SHFQ7M4L6 423 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 GALNT10Q86SR1 603 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms