RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 E7EWF7 191 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 TMX2-CTNND1H3BSU7 103 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 SLITRK3O94933 977 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 MBD3O95983 291 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 TCN2P20062 427 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 HNRNPH3P31942 346 aaKnown RBP4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 DLSTP36957 453 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 ARHGDIAP52565 204 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 IST1P53990 364 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 TLE4Q04727 773 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 C16orf72Q14CZ0 275 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 ZIC1Q15915 447 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 SLC36A3Q495N2 470 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 CFAP221Q4G0U5 840 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 LEMD1Q68G75 181 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 CES3Q6UWW8 571 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 TBCKQ8TEA7 893 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 ITLN2Q8WWU7 325 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 NRGNQ92686 78 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 NAT6Q93015 286 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 DNAJA3Q96EY1 480 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 RBM18Q96H35 190 aaKnown RBP4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 CALN1Q9BXU9 219 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 SLC25A51Q9H1U9 297 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 MCCC2Q9HCC0 563 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 PALMDQ9NP74 551 aa4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 RBM28Q9NW13 759 aaKnown RBP4.92□□□□□ -1.62
HMGB1P32-201ENST00000425971 ZGRF1Q86YA3 2104 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 ZSCAN5CA6NGD5 496 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 ACOD1A6NK06 481 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 C11orf98E9PRG8 122 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 C19orf84I3L1E1 186 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 PIRO00625 290 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 RAMP1O60894 148 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 IGHV3-13P01766 116 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 MS4A2Q01362 244 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 ZFP36L1Q07352 338 aaKnown RBP4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 SNTB2Q13425 540 aaKnown RBP4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 RAB35Q15286 201 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 CST6Q15828 149 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 ZNF630Q2M218 657 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 ANKDD1AQ495B1 522 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 CEACAM19Q7Z692 300 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 FGFRL1Q8N441 504 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 ITLN1Q8WWA0 313 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 DHTKD1Q96HY7 919 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 TXN2Q99757 166 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 ERP44Q9BS26 406 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 TCHPQ9BT92 498 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 GALPQ9UBC7 116 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 CHRNA9Q9UGM1 479 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 CYTH4Q9UIA0 394 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 CACNA1CQ13936 2221 aa4.91□□□□□ -1.62
HMGB1P32-201ENST00000425971 ZNF487B1APH4 448 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 CLDN5O00501 218 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 AQP9O43315 295 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 GALR3O60755 368 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 TBX19O60806 448 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 VENTXO95231 258 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 LYPLA2O95372 231 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 ANP32DO95626 131 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 JCHAINP01591 159 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 CSF2P04141 144 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 PVRP15151 417 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 HNRNPA2B1P22626 353 aaKnown RBP4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 F8A1P23610 371 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 ANP32AP39687 249 aaKnown RBP4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 VEGFCP49767 419 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 METAP1P53582 386 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 UBE2V2Q15819 145 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 NHLRC3Q5JS37 347 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 MMAAQ8IVH4 418 aaKnown RBP4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 ZDHHC21Q8IVQ6 265 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 PDCL2Q8N4E4 241 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 NANPQ8TBE9 248 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 LMX1AQ8TE12 382 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 OSTF1Q92882 214 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 MYLPFQ96A32 169 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 KIAA1143Q96AT1 154 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 TMEM159Q96B96 161 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 ELMO2Q96JJ3 720 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 PSMB7Q99436 277 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 FOXC2Q99958 501 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 OMDQ99983 421 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 SOSTQ9BQB4 213 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 GSDMCQ9BYG8 508 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 RMND5AQ9H871 391 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 DDX19BQ9UMR2 479 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 NTNG1Q9Y2I2 539 aa4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P32-201ENST00000425971 PPIAL4CA0A0B4J2A2 164 aa4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 F8VP50 259 aa4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 PRAMEF26H0Y7S4 382 aa4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 XPO1O14980 1071 aaKnown RBP4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 SLC31A1O15431 190 aa4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 OPN1LWP04000 364 aa4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 PPIAL4GP0DN37 164 aa4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 CLUP10909 449 aa4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 ANXA3P12429 323 aa4.89□□□□□ -1.63
HMGB1P32-201ENST00000425971 OTX2P32243 289 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms