RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 STK32CQ86UX6 486 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 UEVLDQ8IX04 471 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 ZNF100Q8IYN0 542 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 FAM46AQ96IP4 442 aaKnown RBP21.69■■□□□ 1.06
VEGFA-209ENST00000425836 PARPBPQ9NWS1 579 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 TMEM5Q9Y2B1 443 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 C11orf98E9PRG8 122 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 CDC42EP2O14613 210 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 TRAF3IP2O43734 574 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-209ENST00000425836 SAGP10523 405 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-209ENST00000425836 PPP1R8Q12972 351 aaKnown RBP21.68■■□□□ 1.06
VEGFA-209ENST00000425836 CASP12Q6UXS9 341 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 AAED1Q7RTV5 226 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 ZER1Q7Z7L7 766 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 YY1AP1Q9H869 796 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 REEP1Q9H902 201 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 GALNT8Q9NY28 637 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 PRSS50Q9UI38 385 aa21.68■■□□□ 1.06
VEGFA-209ENST00000425836 SAMHD1Q9Y3Z3 626 aaKnown RBP21.68■■□□□ 1.06
VEGFA-209ENST00000425836 RNF13O43567 381 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 UQCRC1P31930 480 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 AQP2P41181 271 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 ACTR3P61158 418 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 POU3F1Q03052 451 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-209ENST00000425836 RPL18Q07020 188 aaKnown RBP21.67■■□□□ 1.06
VEGFA-209ENST00000425836 LAPTM4AQ15012 233 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 MOSPD2Q8NHP6 518 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 APH1AQ96BI3 265 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 LRRC46Q96FV0 321 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 DUS3LQ96G46 650 aaKnown RBP21.67■■□□□ 1.06
VEGFA-209ENST00000425836 RAB3IPQ96QF0 476 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-209ENST00000425836 GPA33Q99795 319 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 PLEKHB1Q9UF11 243 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-209ENST00000425836 FOXD3Q9UJU5 478 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-209ENST00000425836 NOX1Q9Y5S8 564 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 U3KQV3 271 aa21.67■■□□□ 1.06
VEGFA-209ENST00000425836 INTS1Q8N201 2190 aaKnown RBP21.66■■□□□ 1.06
VEGFA-209ENST00000425836 OR10H3O60404 316 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 CLDN17P56750 224 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 FHL1Q13642 323 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 KPNB1Q14974 876 aaKnown RBP21.66■■□□□ 1.06
VEGFA-209ENST00000425836 BEND4Q6ZU67 534 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 OAFQ86UD1 273 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 OR13C2Q8NGS9 318 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 OR51A7Q8NH64 312 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 TXNDC15Q96J42 360 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 KRCC1Q9NPI7 259 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-209ENST00000425836 ELOVL5Q9NYP7 299 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 HIF3AQ9Y2N7 669 aa21.66■■□□□ 1.06
VEGFA-209ENST00000425836 KLF4O43474 513 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 SERPINI2O75830 405 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 IGHV3-9P01782 118 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 CD79BP40259 229 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 SLC9A3P48764 834 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 SELENOPP49908 381 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 RPS4XP62701 263 aaKnown RBP21.65■■□□□ 1.06
VEGFA-209ENST00000425836 FAM27E3Q08E93 113 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 ANKK1Q8NFD2 765 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 TNFRSF13CQ96RJ3 184 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 TRAV27A0A087WT01 109 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 TIPRLO75663 272 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 ZNF432O94892 652 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 NIPAL3Q6P499 406 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 GABRG1Q8N1C3 465 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 ARMC1Q9NVT9 282 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 MED29Q9NX70 200 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 RCE1Q9Y256 329 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 AP4S1Q9Y587 144 aa21.65■■□□□ 1.06
VEGFA-209ENST00000425836 GNGT2O14610 69 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 CCNB2O95067 398 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 F13BP05160 661 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 POU2F1P14859 743 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 IFNGR1P15260 489 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 IFNGR2P38484 337 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 PCYT1AP49585 367 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 IST1P53990 364 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 ANKDD1AQ495B1 522 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 TSPO2Q5TGU0 170 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 FBXW9Q5XUX1 488 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 SP5Q6BEB4 398 aaPredicted RBP21.64■■□□□ 1.05
VEGFA-209ENST00000425836 ZNF770Q6IQ21 691 aaPredicted RBP21.64■■□□□ 1.05
VEGFA-209ENST00000425836 C1orf94Q6P1W5 598 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 PGBD2Q6P3X8 592 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 Q6ZT83 130 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 LINC00471Q8N535 108 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 OR9Q2Q8NGE9 314 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 EMC6Q9BV81 110 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 DNAJB9Q9UBS3 223 aa21.64■■□□□ 1.05
VEGFA-209ENST00000425836 PTP4A3O75365 173 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 CNOT4O95628 575 aaKnown RBP21.63■■□□□ 1.05
VEGFA-209ENST00000425836 IGFBP2P18065 325 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 COL8A1P27658 744 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 GK3PQ14409 553 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 MICAQ29983 383 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 ZBED5Q49AG3 693 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 SLC35D2Q76EJ3 337 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 WDFY1Q8IWB7 410 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 UBE2J2Q8N2K1 259 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 ACBD4Q8NC06 268 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 DENND2DQ9H6A0 471 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms