RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TMEM43Q9BTV4 400 aa14.1□□□□□ -0.15
SHOX2-202ENST00000425436 ZNF703Q9H7S9 590 aaPredicted RBP14.1□□□□□ -0.15
SHOX2-202ENST00000425436 C20orf141Q9NUB4 165 aa14.1□□□□□ -0.15
SHOX2-202ENST00000425436 CARD8Q9Y2G2 431 aa14.1□□□□□ -0.15
SHOX2-202ENST00000425436 ZNF407Q9C0G0 2248 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 BHLHE40O14503 412 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 CDC40O60508 579 aaKnown RBP eCLIP14.09□□□□□ -0.15
SHOX2-202ENST00000425436 CBR3O75828 277 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 IFNGP01579 166 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 HSF1Q00613 529 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 SKP2Q13309 424 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 DCTN2Q13561 401 aaKnown RBP14.09□□□□□ -0.15
SHOX2-202ENST00000425436 SLC10A1Q14973 349 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 SPCS2Q15005 226 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 ANKDD1AQ495B1 522 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 CBLN3Q6UW01 205 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 OR2M3Q8NG83 312 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 OR4K17Q8NGC6 315 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 IFT27Q9BW83 186 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 NDEL1Q9GZM8 345 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 CMC2Q9NRP2 79 aa14.09□□□□□ -0.15
SHOX2-202ENST00000425436 HEATR5AQ86XA9 2040 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 TMEM129A0AVI4 362 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 ELOA3DA6NLF2 546 aaPredicted RBP14.08□□□□□ -0.16
SHOX2-202ENST00000425436 KPNA4O00629 521 aaPredicted RBP14.08□□□□□ -0.16
SHOX2-202ENST00000425436 HCRTR2O43614 444 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 ADAM11O75078 769 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 NTN1O95631 604 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 HSMCR30P0CW71 290 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 PEPDP12955 493 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 HK1P19367 917 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 TDGF1P3P51864 188 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 FOXK1P85037 733 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 ZNF117Q03924 483 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 CRYZQ08257 329 aaKnown RBP14.08□□□□□ -0.16
SHOX2-202ENST00000425436 MLLT11Q13015 90 aaPredicted RBP14.08□□□□□ -0.16
SHOX2-202ENST00000425436 AQP6Q13520 282 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 ELOA3BQ3SY89 546 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 USP43Q70EL4 1123 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 YRDCQ86U90 279 aaKnown RBP14.08□□□□□ -0.16
SHOX2-202ENST00000425436 FAM109AQ8N4B1 249 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 KBTBD8Q8NFY9 601 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 ELOA3Q8NG57 546 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 C3orf49Q96BT1 292 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 ZHX1-C8orf76Q96EF9 292 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 JAM3Q9BX67 310 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 ZDHHC11Q9H8X9 412 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 PLGRKTQ9HBL7 147 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 B4GALT7Q9UBV7 327 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 EXOGQ9Y2C4 368 aaKnown RBP14.08□□□□□ -0.16
SHOX2-202ENST00000425436 ZNF337Q9Y3M9 751 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 LIPGQ9Y5X9 500 aa14.08□□□□□ -0.16
SHOX2-202ENST00000425436 RIIAD1A6NNX1 92 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 IDH3BO43837 385 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 DNAJC13O75165 2243 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 NDUFB2O95178 105 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 PAICSP22234 425 aaKnown RBP14.07□□□□□ -0.16
SHOX2-202ENST00000425436 SLC1A3P43003 542 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 PRPS1P60891 318 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 ARHGAP11AQ6P4F7 1023 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 CXXC5Q7LFL8 322 aaKnown RBP14.07□□□□□ -0.16
SHOX2-202ENST00000425436 ZGRF1Q86YA3 2104 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 FADS6Q8N9I5 356 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 B4GALNT2Q8NHY0 566 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 TBC1D15Q8TC07 691 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 LIPHQ8WWY8 451 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 SLX1AQ9BQ83 275 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 LDAHQ9H6V9 325 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 SIAEQ9HAT2 523 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 SEC14L4Q9UDX3 406 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 RPH3AQ9Y2J0 694 aaPredicted RBP14.07□□□□□ -0.16
SHOX2-202ENST00000425436 LSM2Q9Y333 95 aaKnown RBP14.07□□□□□ -0.16
SHOX2-202ENST00000425436 ZNF462Q96JM2 2506 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 NBASA2RRP1 2371 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 MED12Q93074 2177 aa14.07□□□□□ -0.16
SHOX2-202ENST00000425436 IGLV3-32A0A0A0MS00 114 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 SLC22A31A6NKX4 558 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 PYCARD-AS1I3L0S3 204 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 CH25HO95992 272 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 ZNF3P17036 446 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 PGCP20142 388 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 PSMA1P25786 263 aaKnown RBP14.06□□□□□ -0.16
SHOX2-202ENST00000425436 DPP4P27487 766 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 ATP6V1E1P36543 226 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 VBP1P61758 197 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 WIPI1Q5MNZ9 446 aaPredicted RBP14.06□□□□□ -0.16
SHOX2-202ENST00000425436 ARSKQ6UWY0 536 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 DPY19L2P2Q6ZN68 376 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 MEPCEQ7L2J0 689 aaKnown RBP14.06□□□□□ -0.16
SHOX2-202ENST00000425436 BCDIN3DQ7Z5W3 292 aaKnown RBP14.06□□□□□ -0.16
SHOX2-202ENST00000425436 ATG4DQ86TL0 474 aaPredicted RBP14.06□□□□□ -0.16
SHOX2-202ENST00000425436 CPOQ8IVL8 374 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 TMCO5AQ8N6Q1 288 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 FAM83FQ8NEG4 500 aaPredicted RBP14.06□□□□□ -0.16
SHOX2-202ENST00000425436 OR5M1Q8NGP8 315 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 OR13C2Q8NGS9 318 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 ZNF563Q8TA94 476 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 GPR137Q96N19 417 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 OR5M11Q96RB7 305 aa14.06□□□□□ -0.16
SHOX2-202ENST00000425436 TNFRSF13CQ96RJ3 184 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 234.6 ms