RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 UPB1Q9UBR1 384 aa13.12□□□□□ -0.31
TMEM248-204ENST00000424964 AURKCQ9UQB9 309 aa13.12□□□□□ -0.31
TMEM248-204ENST00000424964 NOX1Q9Y5S8 564 aa13.12□□□□□ -0.31
TMEM248-204ENST00000424964 UTP20O75691 2785 aaKnown RBP13.11□□□□□ -0.31
TMEM248-204ENST00000424964 TRBV4-1A0A0J9YWV2 114 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 RNF13O43567 381 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 SAGP10523 405 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-204ENST00000424964 RRM2P31350 389 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 UGT2B10P36537 528 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 PCYT1AP49585 367 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 POU3F1Q03052 451 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-204ENST00000424964 PRKCDQ05655 676 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 FBXW9Q5XUX1 488 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 ANKRD34AQ69YU3 496 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 STAC2Q6ZMT1 411 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 Q6ZT83 130 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 PIWIL3Q7Z3Z3 882 aaKnown RBP13.11□□□□□ -0.31
TMEM248-204ENST00000424964 CXorf67Q86X51 503 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-204ENST00000424964 GABRG1Q8N1C3 465 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 MARVELD3Q96A59 401 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 DHRS1Q96LJ7 313 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 TAS2R5Q9NYW4 299 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-204ENST00000424964 NDRG3Q9UGV2 375 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 SLC7A8Q9UHI5 535 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
TMEM248-204ENST00000424964 HECTD1Q9ULT8 2610 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 DHRS12A0PJE2 317 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 EFCAB9A8MZ26 197 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 AKAP8O43823 692 aaKnown RBP13.1□□□□□ -0.31
TMEM248-204ENST00000424964 KRT33AO76009 404 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 CNOT4O95628 575 aaKnown RBP13.1□□□□□ -0.31
TMEM248-204ENST00000424964 RAP2AP10114 183 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 HLA-DOBP13765 273 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 MAKP20794 623 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 IL32P24001 234 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 GPR4P46093 362 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 SELENOPP49908 381 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 ERFP50548 548 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 ZP4Q12836 540 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 FAPQ12884 760 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 P2RY6Q15077 328 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 TSPO2Q5TGU0 170 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 PXKQ7Z7A4 578 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 CANT1Q8WVQ1 401 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 LIPHQ8WWY8 451 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 KISS1RQ969F8 398 aaPredicted RBP13.1□□□□□ -0.31
TMEM248-204ENST00000424964 HDHD5Q9BXW7 423 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 SLCO5A1Q9H2Y9 848 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 KRCC1Q9NPI7 259 aaPredicted RBP13.1□□□□□ -0.31
TMEM248-204ENST00000424964 SLC7A10Q9NS82 523 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 ASB6Q9NWX5 421 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 CRIM1Q9NZV1 1036 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 TMCC3Q9ULS5 477 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 GPR52Q9Y2T5 361 aa13.1□□□□□ -0.31
TMEM248-204ENST00000424964 SH3D21A4FU49 640 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 ZNF726A6NNF4 738 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 TRAF3IP2O43734 574 aaPredicted RBP13.09□□□□□ -0.31
TMEM248-204ENST00000424964 SLC43A1O75387 559 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 LYZL6O75951 148 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 KRT36O76013 467 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 PSMB1P20618 241 aaKnown RBP13.09□□□□□ -0.31
TMEM248-204ENST00000424964 IGHV1-2P23083 117 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 DNAJA1P31689 397 aaKnown RBP13.09□□□□□ -0.31
TMEM248-204ENST00000424964 AQP2P41181 271 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 MAGEA2P43356 314 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 RPL18Q07020 188 aaKnown RBP13.09□□□□□ -0.31
TMEM248-204ENST00000424964 ITGADQ13349 1161 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 LAPTM4AQ15012 233 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 SEC23BQ15437 767 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 TSC22D1Q15714 1073 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 SFRP5Q5T4F7 317 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 OAFQ86UD1 273 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 ADGRG5Q8IZF4 528 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 POMGNT2Q8NAT1 580 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 STEAP2Q8NFT2 490 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 OR4K5Q8NGD3 323 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 FAM222BQ8WU58 562 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 FAM46AQ96IP4 442 aaKnown RBP13.09□□□□□ -0.31
TMEM248-204ENST00000424964 TXNDC15Q96J42 360 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 WFIKKN1Q96NZ8 548 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 ALPK1Q96QP1 1244 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 MED18Q9BUE0 208 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 EMC6Q9BV81 110 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 CHID1Q9BWS9 393 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 MED29Q9NX70 200 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 KCNN3Q9UGI6 736 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 RCE1Q9Y256 329 aa13.09□□□□□ -0.31
TMEM248-204ENST00000424964 ADGRG4Q8IZF6 3080 aa13.08□□□□□ -0.32
TMEM248-204ENST00000424964 CIB4A0PJX0 185 aa13.08□□□□□ -0.32
TMEM248-204ENST00000424964 SH3PXD2BA1X283 911 aa13.08□□□□□ -0.32
TMEM248-204ENST00000424964 OR6C65A6NJZ3 312 aa13.08□□□□□ -0.32
TMEM248-204ENST00000424964 TNFRSF11BO00300 401 aa13.08□□□□□ -0.32
TMEM248-204ENST00000424964 CASKO14936 926 aa13.08□□□□□ -0.32
TMEM248-204ENST00000424964 CIB2O75838 187 aa13.08□□□□□ -0.32
TMEM248-204ENST00000424964 F13BP05160 661 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms