RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 HIF3AQ9Y2N7 669 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 EMC9Q9Y3B6 208 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 FLVCR1Q9Y5Y0 555 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 UNC119BA6NIH7 251 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 BLOC1S5-TXNDC5H3BN57 136 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 GPR171O14626 319 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 TRAF3IP2O43734 574 aaPredicted RBP15.1■□□□□ 0.01
COL7A1-202ENST00000422991 OR6A2O95222 327 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 IL18BPO95998 194 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 AQP2P41181 271 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 SMSP52788 366 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 SIRPAP78324 504 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 IL1RL1Q01638 556 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 TSPAN31Q12999 210 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 VWA1Q6PCB0 445 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 EPHX4Q8IUS5 362 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 CNEP1R1Q8N9A8 125 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 ZIC4Q8N9L1 334 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 OR6K3Q8NGY3 331 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 MOSPD2Q8NHP6 518 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 SEMA6AQ9H2E6 1030 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 MCCC2Q9HCC0 563 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 ZNF629Q9UEG4 869 aaPredicted RBP15.1■□□□□ 0.01
COL7A1-202ENST00000422991 MGAT4BQ9UQ53 548 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 SIGLEC7Q9Y286 467 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 NOX1Q9Y5S8 564 aa15.1■□□□□ 0.01
COL7A1-202ENST00000422991 MAGED1Q9Y5V3 778 aaPredicted RBP15.1■□□□□ 0.01
COL7A1-202ENST00000422991 USP9YO00507 2555 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-202ENST00000422991 C11orf98E9PRG8 122 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 RNF13O43567 381 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ZG16O60844 167 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 PTP4A3O75365 173 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ADAP00813 363 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 GASTP01350 101 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 HLA-DOBP13765 273 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ZNF26P17031 533 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ZNF43P17038 809 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 AHCYP23526 432 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 CHRNB4P30926 498 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 OPRM1P35372 400 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ARHGDIAP52565 204 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 POU3F1Q03052 451 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ZBED5Q49AG3 693 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 TMEM201Q5SNT2 666 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 EEF1A1P5Q5VTE0 462 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 NHLRC1Q6VVB1 395 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 CREB3L2Q70SY1 520 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 PXKQ7Z7A4 578 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 GALNT5Q7Z7M9 940 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 HIPK1Q86Z02 1210 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 UEVLDQ8IX04 471 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 PQLC1Q8N2U9 271 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 SVOPLQ8N434 492 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ANKK1Q8NFD2 765 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 OR51A7Q8NH64 312 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ITLN2Q8WWU7 325 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ASB5Q8WWX0 329 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 TMEM45BQ96B21 275 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ZNF775Q96BV0 537 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-202ENST00000422991 SDCCAG3Q96C92 435 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 STARD4Q96DR4 205 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 ZNF385AQ96PM9 386 aaKnown RBP15.09■□□□□ 0.01
COL7A1-202ENST00000422991 TNFRSF13CQ96RJ3 184 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 FEVQ99581 238 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 GABARAPL1Q9H0R8 117 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 COQ3Q9NZJ6 369 aa15.09■□□□□ 0.01
COL7A1-202ENST00000422991 DVL2O14641 736 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 POU2F1P14859 743 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 ZNF23P17027 643 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 BMP5P22003 454 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 PRKACGP22612 351 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 FXYD6P3P58550 94 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 C1DQ13901 141 aaKnown RBP15.08■□□□□ 0
COL7A1-202ENST00000422991 RCN1Q15293 331 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 ALG10Q5BKT4 473 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 ZNF620Q6ZNG0 422 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 NUFIP2Q7Z417 695 aaKnown RBP15.08■□□□□ 0
COL7A1-202ENST00000422991 BTLAQ7Z6A9 289 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 ZDHHC13Q8IUH4 622 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 LIX1LQ8IVB5 337 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 LRRC75AQ8NAA5 344 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 RELL2Q8NC24 303 aaPredicted RBP15.08■□□□□ 0
COL7A1-202ENST00000422991 FANK1Q8TC84 345 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 GTPBP3Q969Y2 492 aaKnown RBP15.08■□□□□ 0
COL7A1-202ENST00000422991 PSMG3-AS1Q96PY0 264 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 NIPSNAP1Q9BPW8 284 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 INIPQ9NRY2 104 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 OAZ3Q9UMX2 235 aa15.08■□□□□ 0
COL7A1-202ENST00000422991 NOSIPQ9Y314 301 aaKnown RBP15.08■□□□□ 0
COL7A1-202ENST00000422991 SAC3D1A6NKF1 404 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 G3V2T6 193 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 SERPINI2O75830 405 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 NDUFB2O95178 105 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 CGAP01215 116 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 F13BP05160 661 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 ANXA8P13928 327 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 AGAP20933 346 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 GSTM3P21266 225 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 NTF4P34130 210 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 PRPS1P60891 318 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms