RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CIB4A0PJX0 185 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 FZD7O75084 574 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 LYZL6O75951 148 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 PRSS23O95084 383 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 GADD45GO95257 159 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 CNOT4O95628 575 aaKnown RBP13.93□□□□□ -0.18
BRAT1-202ENST00000421712 HPRP00739 348 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 SEMG1P04279 462 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 SAGP10523 405 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-202ENST00000421712 EPXP11678 715 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 DNAJA1P31689 397 aaKnown RBP13.93□□□□□ -0.18
BRAT1-202ENST00000421712 PCYT1AP49585 367 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 SELENOPP49908 381 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 POU3F1Q03052 451 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-202ENST00000421712 ITGADQ13349 1161 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 P2RY6Q15077 328 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 SFRP5Q5T4F7 317 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 PODNL1Q6PEZ8 512 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 SLC46A3Q7Z3Q1 461 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 MEX3DQ86XN8 651 aaKnown RBP13.93□□□□□ -0.18
BRAT1-202ENST00000421712 NRMQ8IXM6 262 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 RNF113BQ8IZP6 322 aaKnown RBP13.93□□□□□ -0.18
BRAT1-202ENST00000421712 ACBD4Q8NC06 268 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 STEAP2Q8NFT2 490 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 POP5Q969H6 163 aaKnown RBP13.93□□□□□ -0.18
BRAT1-202ENST00000421712 DACH2Q96NX9 599 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 WFIKKN1Q96NZ8 548 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 ZNF347Q96SE7 839 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 CADM1Q9BY67 442 aaKnown RBP13.93□□□□□ -0.18
BRAT1-202ENST00000421712 ACTR6Q9GZN1 396 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 SLCO5A1Q9H2Y9 848 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 ANKRD19PQ9H560 264 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 B3GAT1Q9P2W7 334 aa13.93□□□□□ -0.18
BRAT1-202ENST00000421712 A0A087WUU8 490 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 LOC102725191A0A1B0GVB3 256 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 A0A1W2PRQ8 180 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 TCRBV5S2A0A599 114 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 HTR3EA5X5Y0 456 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 ZNF726A6NNF4 738 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 EBAG9O00559 213 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 ACOT8O14734 319 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 ASAH2BP0C7U1 165 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 HLA-DOBP13765 273 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 PSMB1P20618 241 aaKnown RBP13.92□□□□□ -0.18
BRAT1-202ENST00000421712 SSTR2P30874 369 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 LSM11P83369 360 aaKnown RBP eCLIP13.92□□□□□ -0.18
BRAT1-202ENST00000421712 TLE4Q04727 773 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 DGCR6Q14129 220 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 FLOT2Q14254 428 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 TSPO2Q5TGU0 170 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 C9orf135Q5VTT2 229 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 CARD17Q5XLA6 110 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 PGM2L1Q6PCE3 622 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 MBOAT2Q6ZWT7 520 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 BHLHA15Q7RTS1 189 aaPredicted RBP13.92□□□□□ -0.18
BRAT1-202ENST00000421712 PXKQ7Z7A4 578 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 SPATA24Q86W54 205 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 POMGNT2Q8NAT1 580 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 ANKK1Q8NFD2 765 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 TXNDC15Q96J42 360 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 EMC6Q9BV81 110 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 MAGIXQ9H6Y5 334 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 KRCC1Q9NPI7 259 aaPredicted RBP13.92□□□□□ -0.18
BRAT1-202ENST00000421712 SLC7A10Q9NS82 523 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 ZNF226Q9NYT6 803 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 TAS2R5Q9NYW4 299 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 TMCC3Q9ULS5 477 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 AURKCQ9UQB9 309 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 CACNA1DQ01668 2161 aa13.92□□□□□ -0.18
BRAT1-202ENST00000421712 OR6C65A6NJZ3 312 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 EFCAB9A8MZ26 197 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 SLC43A1O75387 559 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 IGF2P01344 180 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 IFNGR1P15260 489 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 PPP3CBP16298 524 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 CDH2P19022 906 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-202ENST00000421712 MAKP20794 623 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 IGHV1-2P23083 117 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 RRM2P31350 389 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 CCKARP32238 428 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 AQP2P41181 271 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 PRKCDQ05655 676 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 ZP4Q12836 540 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 STK11Q15831 433 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 ABHD12BQ7Z5M8 362 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-202ENST00000421712 TMEM200AQ86VY9 491 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 ZNF295-AS1Q8N0V1 137 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 GPR137CQ8N3F9 429 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 SLC7A13Q8TCU3 470 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 S100PBPQ96BU1 408 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 MED29Q9NX70 200 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 POMPQ9Y244 141 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 RCE1Q9Y256 329 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 NAV2Q8IVL1 2488 aa13.91□□□□□ -0.18
BRAT1-202ENST00000421712 TRBV4-1A0A0J9YWV2 114 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 A0A1W2PRG6 482 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 SLC35F4A4IF30 521 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 AQP12BA6NM10 295 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 ZNF587BE7ETH6 402 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 TRAF3IP2O43734 574 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms