RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 MPDZO75970 2070 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 G3V3Y1 287 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 PLPP3O14495 311 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 IDUAP35475 653 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 WNT4P56705 351 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 MESTQ5EB52 335 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 DCAF10Q5QP82 559 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 BEST3Q8N1M1 668 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 TMEM99Q8N816 258 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 EXD3Q8N9H8 876 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 PSD4Q8NDX1 1056 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 OR5M1Q8NGP8 315 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 MFSD8Q8NHS3 518 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 MCFD2Q8NI22 146 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 ZNF417Q8TAU3 575 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 DACH2Q96NX9 599 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 ZNF587Q96SQ5 575 aaPredicted RBP18.89■□□□□ 0.61
GPC1-202ENST00000420138 ASB6Q9NWX5 421 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 MRPL39Q9NYK5 338 aaKnown RBP18.89■□□□□ 0.61
GPC1-202ENST00000420138 ZNF346Q9UL40 294 aaKnown RBP18.89■□□□□ 0.61
GPC1-202ENST00000420138 CPAMD8Q8IZJ3 1885 aa18.89■□□□□ 0.61
GPC1-202ENST00000420138 FZD7O75084 574 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 SBK2P0C263 348 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 LIFP15018 202 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 ZNF12P17014 697 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 RPS7P62081 194 aaKnown RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 MLLT11Q13015 90 aaPredicted RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 C1DQ13901 141 aaKnown RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 EMC4Q5J8M3 183 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 GHDCQ8N2G8 530 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 GNRHR2Q96P88 292 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 CENPOQ9BU64 300 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 POTEKPQ9BYX7 375 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 MMP27Q9H306 513 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 PTGES2Q9H7Z7 377 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 WDR70Q9NW82 654 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 METTL15A6NJ78 407 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 C12orf71A8MTZ7 269 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 SPI1P17947 270 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 TCEA1P23193 301 aaKnown RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 ATP6V1E1P36543 226 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 SLC16A1P53985 500 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 C19orf57Q0VDD7 668 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 ZNF404Q494X3 552 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 JMJD6Q6NYC1 403 aaPredicted RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 LEG1Q6P5S2 330 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 Q6ZNX1 250 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 ATP6V1C2Q8NEY4 427 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 OR51L1Q8NGJ5 315 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 GATAD2BQ8WXI9 593 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 KIAA1143Q96AT1 154 aaPredicted RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 DDIT4LQ96D03 193 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 UBL7Q96S82 380 aaPredicted RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 CHCHD3Q9NX63 227 aaKnown RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 CCDC59Q9P031 241 aaKnown RBP18.88■□□□□ 0.61
GPC1-202ENST00000420138 A3GALT2U3KPV4 340 aa18.88■□□□□ 0.61
GPC1-202ENST00000420138 A0A0G2JMM0 328 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 A0A1W2PPB8 328 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 A0A1W2PRS3 328 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 KIR3DP1A8MWS1 328 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 C11orf98E9PRG8 122 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 H3BML4 177 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 TRIM3O75382 744 aaPredicted RBP18.87■□□□□ 0.61
GPC1-202ENST00000420138 SDHBP21912 280 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 ADH6P28332 368 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 GGTLC2Q14390 218 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 SOWAHCQ53LP3 525 aaPredicted RBP18.87■□□□□ 0.61
GPC1-202ENST00000420138 TIGD3Q6B0B8 471 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 ACBD7Q8N6N7 88 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 TMEM41AQ96HV5 264 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 ARHGAP9Q9BRR9 750 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 ASPNQ9BXN1 380 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 GRHPRQ9UBQ7 328 aa18.87■□□□□ 0.61
GPC1-202ENST00000420138 LIPT2A6NK58 231 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 SERPINI2O75830 405 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 SNX4O95219 450 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 LALBAP00709 142 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 MRPL3P09001 348 aaKnown RBP18.86■□□□□ 0.61
GPC1-202ENST00000420138 LIPCP11150 499 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 SLC25A1P53007 311 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 CAMK2BQ13554 666 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 KRR1Q13601 381 aaKnown RBP18.86■□□□□ 0.61
GPC1-202ENST00000420138 OR7A5Q15622 319 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 LINC01590Q5TEZ4 76 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 GPR139Q6DWJ6 353 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 MFSD4AQ8N468 514 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 SMAP2Q8WU79 429 aaPredicted RBP18.86■□□□□ 0.61
GPC1-202ENST00000420138 ZBTB8AQ96BR9 441 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 ZMYND19Q96E35 227 aaPredicted RBP18.86■□□□□ 0.61
GPC1-202ENST00000420138 RNF167Q9H6Y7 350 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 INIPQ9NRY2 104 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 hCG_2014768A0A024R1R8 64 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 A0A087WZY1 265 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 MS4A18H0YCH9 400 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 ZIC3O60481 467 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 TFP02787 698 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 BMP4P12644 408 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 SHC1P29353 583 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 EIF1P41567 113 aaKnown RBP18.86■□□□□ 0.61
GPC1-202ENST00000420138 DIO1P49895 249 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms