RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 OR10T2Q8NGX3 314 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 OR10A6Q8NH74 314 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ZFAND1Q8TCF1 268 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ZNF675Q8TD23 568 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 UBTD2Q8WUN7 234 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SLC7A6Q92536 515 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 AP3S1Q92572 193 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TSACCQ96A04 125 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 TESCQ96BS2 214 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 AP2M1Q96CW1 435 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CELF6Q96J87 481 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 ART5Q96L15 291 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SENP8Q96LD8 212 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 C4orf45Q96LM5 186 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TEX37Q96LM6 180 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 Q96MT0 163 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 KCNA7Q96RP8 456 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MAP3K3Q99759 626 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MAPKAP1Q9BPZ7 522 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CCDC3Q9BQI4 270 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MGME1Q9BQP7 344 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ACBD6Q9BR61 282 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TMEM246Q9BRR3 403 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 NTMT1Q9BV86 223 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CDCA4Q9BXL8 241 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ZYG11BQ9C0D3 744 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SLC39A8Q9C0K1 460 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CLMPQ9H6B4 373 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RNF121Q9H920 327 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RDH14Q9HBH5 336 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ZFP14Q9HCL3 533 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 NT5MQ9NPB1 228 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 POLE4Q9NR33 117 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ACOXLQ9NUZ1 547 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 NLE1Q9NVX2 485 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 RNF186Q9NXI6 227 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 B3GNT2Q9NY97 397 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 IL37Q9NZH6 218 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CD274Q9NZQ7 290 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 PDP1Q9P0J1 537 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 VAPAQ9P0L0 249 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CACNG5Q9UF02 275 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 EPHA6Q9UF33 1036 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 KCNN3Q9UGI6 736 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 PSORS1C1Q9UIG5 152 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 IKZF3Q9UKT9 509 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RAB23Q9ULC3 237 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.31□□□□□ -2.04
VPS41-206ENST00000418457 SNX7Q9UNH6 387 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 PRELID1Q9Y255 219 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ITM2BQ9Y287 266 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 POLR3HQ9Y535 204 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 ASB4Q9Y574 426 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 V9GYQ6 96 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TNRC18O15417 2968 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 MCM3APO60318 1980 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 IGLV3-10A0A075B6K4 115 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 KRT87PA6NCN2 255 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 TUBAL3A6NHL2 446 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 C9JVG2 144 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 E5RI56 91 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ZNF670-ZNF695F2Z2N8 137 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CACNB4O00305 520 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 CDC7O00311 574 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CLDN5O00501 218 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CXCL11O14625 94 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FPGTO14772 594 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ORC5O43913 435 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 KIAA0513O60268 411 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SCN2BO60939 215 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ZNF780AO75290 641 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 ZNF821O75541 412 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 WBP4O75554 376 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 SEMA3DO95025 777 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 PGLSO95336 258 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ZNF682O95780 498 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 TSPAN12O95859 305 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 IFNA14P01570 189 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 HLA-DQB1P01920 261 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 VTNP04004 478 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 RNF224P0DH78 156 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ADORA3P0DMS8 318 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 PRKAR1AP10644 381 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SLC2A2P11168 524 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 GLULP15104 373 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ZNF7P17097 686 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 GPX2P18283 190 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 TYMPP19971 482 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 C4BPBP20851 252 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 PRPS1L1P21108 318 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 RPS3P23396 243 aaKnown RBP eCLIP2.3□□□□□ -2.04
VPS41-206ENST00000418457 MYL9P24844 172 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 PSMA1P25786 263 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 GTF2E2P29084 291 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 HOXA9P31269 272 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 S100A3P33764 101 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 KDELR2P33947 212 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CA5AP35218 305 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 OR3A3P47888 321 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SLC6A12P48065 614 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms