RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ICAM4Q14773 271 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF239Q16600 458 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 GOLGA7BQ2TAP0 167 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM35AQ53FP2 167 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 RNASE10Q5GAN6 216 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF766Q5HY98 468 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 PAGE2BQ5JRK9 111 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 SYT6Q5T7P8 510 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 REP15Q6BDI9 236 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 ABLIM2Q6H8Q1 611 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 RGS7BPQ6MZT1 257 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 PMF1Q6P1K2 205 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TRILQ7L0X0 811 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 BHLHA15Q7RTS1 189 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 SMIM15Q7Z3B0 74 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 GALNTL5Q7Z4T8 443 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 WDR53Q7Z5U6 358 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 CCDC190Q86UF4 302 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 LRRTM4Q86VH4 590 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 P2RY8Q86VZ1 359 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 LNX2Q8N448 690 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 DNAJC22Q8N4W6 341 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF561Q8N587 486 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 OR10A7Q8NGE5 316 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 OR10Q1Q8NGQ4 319 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 DTD1Q8TEA8 209 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM171Q8WVE6 324 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 CCDC124Q96CT7 223 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 NUS1Q96E22 293 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 YIPF6Q96EC8 236 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 NARS2Q96I59 477 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF845Q96IR2 970 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF599Q96NL3 588 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 OR2A14Q96R47 310 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 NODALQ96S42 347 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 MAPKAP1Q9BPZ7 522 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 RBM4BQ9BQ04 359 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 APOL2Q9BQE5 337 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 PCGF1Q9BSM1 259 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 RBM4Q9BWF3 364 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TRIM31Q9BZY9 425 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF436Q9C0F3 470 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 SLC25A32Q9H2D1 315 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TMPRSS5Q9H3S3 457 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 RIMS4Q9H426 269 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 HEXA-AS1Q9H8Q6 139 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 COPS7BQ9H9Q2 264 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 RANGRFQ9HD47 186 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 CCNB1IP1Q9NPC3 277 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 SOHLH2Q9NX45 425 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TEX10Q9NXF1 929 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TAS2R3Q9NYW6 316 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM181Q9P2C4 612 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 SLC9A8Q9Y2E8 581 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 HSPB11Q9Y547 144 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 LYVE1Q9Y5Y7 322 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 PUS1Q9Y606 427 aaKnown RBP eCLIP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 ALG5Q9Y673 324 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 TRRAPQ9Y4A5 3859 aa4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 PRKDCP78527 4128 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-206ENST00000417628 A0A087X0T9 212 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TEX13CA0A0J9YWL9 993 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 A0A1B0GVI7 797 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TSPAN11A1L157 253 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ASPDHA6ND91 283 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 C5orf52A6NGY3 159 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ARHGEF33A8MVX0 844 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF99A8MXY4 864 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 B9A039 149 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM150CB9EJG8 249 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 F5H697 171 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 DLGAP1O14490 977 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ADAMDEC1O15204 470 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 PLIN3O60664 434 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 CTNSO60931 367 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 MED6O75586 246 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 SCAF4O95104 1147 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 MT-CYBP00156 380 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 VIPP01282 170 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 HLA-DQB1P01920 261 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 PPBPP02775 128 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 RLN2P04090 185 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ALPLP05186 524 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 HOXB6P17509 224 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 HLA-DPA1P20036 260 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 GATA3P23771 443 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 CRHBPP24387 322 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 MYL9P24844 172 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 NUDT6P53370 316 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TAS2R40P59535 323 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 RPS7P62081 194 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 BTG1P62324 171 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 SLC25A3Q00325 362 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ACSM1Q08AH1 577 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 SLAMF1Q13291 335 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ALKBH1Q13686 389 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 HLXQ14774 488 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 NEDD8Q15843 81 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 IL17AQ16552 155 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 HAGHQ16775 308 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms