RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ULBP3Q9BZM4 244 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 OR10A5Q9H207 317 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 RXFP3Q9NSD7 469 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 DZANK1Q9NVP4 752 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 FRRS1LQ9P0K9 344 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 ATG2AQ2TAZ0 1938 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 KHDRBS3O75525 346 aaKnown RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 MAS1P04201 325 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 ANXA7P20073 488 aaKnown RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 CDK2P24941 298 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 CAPZA2P47755 286 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 PPM1FP49593 454 aaPredicted RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 ARPC4P59998 168 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 EXOSC2Q13868 293 aaKnown RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 PWWP2BQ6NUJ5 590 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 MED25Q71SY5 747 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 ADAD1Q96M93 576 aaKnown RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 ELF4Q99607 663 aaPredicted RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 ZNF436Q9C0F3 470 aaPredicted RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 PRTFDC1Q9NRG1 225 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 CA10Q9NS85 328 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 MRM2Q9UI43 246 aaKnown RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
HDAC9-208ENST00000417496 TICRRQ7Z2Z1 1910 aa13.2□□□□□ -0.3
HDAC9-208ENST00000417496 ELOA3DA6NLF2 546 aaPredicted RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 ARPC3O15145 178 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 CTNSO60931 367 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 GLCEO94923 617 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 RNH1P13489 461 aaKnown RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 MAOBP27338 520 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 CTXN1P60606 82 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 EIF2B5Q13144 721 aaKnown RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 SNTA1Q13424 505 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 ELOA3BQ3SY89 546 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 TMEM69Q5SWH9 247 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 ZNF684Q5T5D7 378 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 ARMC6Q6NXE6 501 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 STAC2Q6ZMT1 411 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 CCDC28AQ8IWP9 274 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 CMIPQ8IY22 773 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 LSM14AQ8ND56 463 aaKnown RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 ELOA3Q8NG57 546 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 G6PC3Q9BUM1 346 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 NANSQ9NR45 359 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 SDK1Q7Z5N4 2213 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 TRAV8-7A0A075B6U6 113 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 EFCAB7A8K855 629 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 A8MUA0 341 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 CTDSPLO15194 276 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 WISP1O95388 367 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 ZNF250P15622 560 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 GABRG2P18507 467 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 MST1P26927 711 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 GRK6P43250 576 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 BLVRAP53004 296 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 MAZP56270 477 aaKnown RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 RPS4XP62701 263 aaKnown RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 LTBQ06643 244 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 SHHQ15465 462 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 JAZF1Q86VZ6 243 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 SLC35F3Q8IY50 421 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 FTMTQ8N4E7 242 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 C19orf47Q8N9M1 422 aaKnown RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 SUN5Q8TC36 379 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 FCAMRQ8WWV6 532 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 HGDQ93099 445 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 NXPE2Q96DL1 559 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 MMABQ96EY8 250 aaPredicted RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 CCDC120Q96HB5 630 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 MAP3K3Q99759 626 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 SEMA6CQ9H3T2 930 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 NARFLQ9H6Q4 476 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 WDR76Q9H967 626 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 TCF7L1Q9HCS4 588 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 MRPL39Q9NYK5 338 aaKnown RBP13.19□□□□□ -0.3
HDAC9-208ENST00000417496 KLHL9Q9P2J3 617 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 SCML1Q9UN30 329 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 FOXJ3Q9UPW0 622 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 PCDHGA5Q9Y5G8 931 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 FKBP7Q9Y680 259 aa13.19□□□□□ -0.3
HDAC9-208ENST00000417496 KHNYNO15037 678 aaKnown RBP13.18□□□□□ -0.3
HDAC9-208ENST00000417496 GPRIN2O60269 458 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 RAD1O60671 282 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 PRAMEF2O60811 474 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 UPK3AO75631 287 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 P2RX1P51575 399 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 EGR4Q05215 589 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 LINC00303Q3SY05 128 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 ALG10Q5BKT4 473 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 SIGIRRQ6IA17 410 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.18□□□□□ -0.3
HDAC9-208ENST00000417496 PRR22Q8IZ63 422 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 KTI12Q96EK9 354 aaPredicted RBP13.18□□□□□ -0.3
HDAC9-208ENST00000417496 S100A16Q96FQ6 103 aaKnown RBP13.18□□□□□ -0.3
HDAC9-208ENST00000417496 RBP7Q96R05 134 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 NOX3Q9HBY0 568 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
HDAC9-208ENST00000417496 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms