RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CXorf67Q86X51 503 aaPredicted RBP20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 LRRC17Q8N6Y2 441 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 POMGNT2Q8NAT1 580 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 STEAP2Q8NFT2 490 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 LINC01560Q8TB33 94 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 LIPHQ8WWY8 451 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 BPIFA2Q96DR5 249 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 CADM1Q9BY67 442 aaKnown RBP20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 ASB6Q9NWX5 421 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 CRIM1Q9NZV1 1036 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 B3GAT1Q9P2W7 334 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 RCE1Q9Y256 329 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 A0A087WUU8 490 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 TCRBV5S2A0A599 114 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 SH3D21A4FU49 640 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 EBAG9O00559 213 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 CASKO14936 926 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 EPXP11678 715 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 HOXB6P17509 224 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 PRKCDQ05655 676 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 IQCCQ4KMZ1 466 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 FGD3Q5JSP0 725 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 SFRP5Q5T4F7 317 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 NIPAL3Q6P499 406 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 SLC46A3Q7Z3Q1 461 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 ABHD12BQ7Z5M8 362 aaPredicted RBP20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 NRMQ8IXM6 262 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 KISS1RQ969F8 398 aaPredicted RBP20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 KRCC1Q9NPI7 259 aaPredicted RBP20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 C20orf141Q9NUB4 165 aa20.42■□□□□ 0.86
SMARCB1-205ENST00000417137 AQP12BA6NM10 295 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 BLOC1S5-TXNDC5H3BN57 136 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 RNF13O43567 381 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 KRT33AO76009 404 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 DIRAS1O95057 198 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 GADD45GO95257 159 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 IGHV3-9P01782 118 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 IL32P24001 234 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 SSTR2P30874 369 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 SPIBQ01892 262 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 AQP12AQ8IXF9 295 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 ANKK1Q8NFD2 765 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 SLC7A13Q8TCU3 470 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 C14orf79Q96F83 325 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 DHRS1Q96LJ7 313 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 MED18Q9BUE0 208 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 SLCO5A1Q9H2Y9 848 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 TAS2R5Q9NYW4 299 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 MALT1Q9UDY8 824 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 TESMINQ9Y4I5 508 aa20.41■□□□□ 0.86
SMARCB1-205ENST00000417137 C11orf98E9PRG8 122 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 SLC43A1O75387 559 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 MPDZO75970 2070 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 HPRP00739 348 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 EDNRAP25101 427 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 POU3F1Q03052 451 aaPredicted RBP20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 FAPQ12884 760 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 FLOT2Q14254 428 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 PODNL1Q6PEZ8 512 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 OR52J3Q8NH60 311 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 WFIKKN1Q96NZ8 548 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 SLC7A10Q9NS82 523 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 ZNF226Q9NYT6 803 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 TMEM5Q9Y2B1 443 aa20.4■□□□□ 0.86
SMARCB1-205ENST00000417137 ZNF726A6NNF4 738 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 EFCAB9A8MZ26 197 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 TRAF3IP2O43734 574 aaPredicted RBP20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 PIP5K1CO60331 668 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 KRT36O76013 467 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 SAGP10523 405 aaPredicted RBP20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 FUT4P22083 530 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 SELENOPP49908 381 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 DAZAP2Q15038 168 aaPredicted RBP20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 ANKDD1AQ495B1 522 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 TSPO2Q5TGU0 170 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 ANKRD34AQ69YU3 496 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 TBPL2Q6SJ96 375 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 BHLHA15Q7RTS1 189 aaPredicted RBP20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 ACTR6Q9GZN1 396 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 LRMDAQ9H2I8 198 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 TAS2R16Q9NYV7 291 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 TMCC3Q9ULS5 477 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 POMPQ9Y244 141 aa20.39■□□□□ 0.85
SMARCB1-205ENST00000417137 CIB4A0PJX0 185 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 SERPINI2O75830 405 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 RAP2AP10114 183 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 HLA-DOBP13765 273 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 COX5AP20674 150 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 IGHV1-2P23083 117 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 RRM2P31350 389 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 MAGEA2P43356 314 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 SLC9A3P48764 834 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 TGFBR3Q03167 851 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 ZNF295-AS1Q8N0V1 137 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 ADAD1Q96M93 576 aaKnown RBP20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 LINC00470Q9BZP3 86 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 MCCC2Q9HCC0 563 aa20.38■□□□□ 0.85
SMARCB1-205ENST00000417137 TRBV4-1A0A0J9YWV2 114 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 A0A1W2PRG6 482 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms