RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 LRRC3BQ96PB8 259 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 GFI1Q99684 422 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 GPR174Q9BXC1 333 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 FAM117AQ9C073 453 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 SIDT1Q9NXL6 827 aaKnown RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 FBXO4Q9UKT5 387 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 EFCAB7A8K855 629 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 C1orf196B1AJZ1 125 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 MOSPD3O75425 235 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 LATS1O95835 1130 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 ANXA2P07355 339 aaKnown RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 MAKP20794 623 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 AGTR1P30556 359 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 BSGP35613 385 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PBX2P40425 430 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 FXYD6P3P58550 94 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 SIRPAP78324 504 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 TMEM115Q12893 351 aaPredicted RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PLA2G7Q13093 441 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 UQCC3Q6UW78 93 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 NUDT18Q6ZVK8 323 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 OVCH1Q7RTY7 1134 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 GLB1L2Q8IW92 636 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 GJD3Q8N144 294 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 TEX19Q8NA77 164 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR9A1PQ8NGU1 263 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 C14orf79Q96F83 325 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 ZC3H10Q96K80 434 aaKnown RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 POFUT1Q9H488 388 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 TAC3Q9UHF0 121 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PLEKHA6Q9Y2H5 1048 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 MRPS23Q9Y3D9 190 aaKnown RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 V9GY05 133 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 ASCC3Q8N3C0 2202 aaKnown RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 SLC5A10A0PJK1 596 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PPP1R3DO95685 299 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 ST8SIA6P61647 398 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PPP2CBP62714 309 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PPP2CAP67775 309 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 ACER2Q5QJU3 275 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 FIP1L1Q6UN15 594 aaKnown RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 MAMSTRQ6ZN01 415 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 DPPA4Q7L190 304 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 SFTPA1Q8IWL2 248 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR10R2Q8NGX6 335 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR4C6Q8NH72 309 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 SP7Q8TDD2 431 aaPredicted RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 UBE2E3Q969T4 207 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 C3orf49Q96BT1 292 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PFDN5Q99471 154 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PIN1P1O15428 100 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 GKN3PP0CG01 181 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 RNF224P0DH78 156 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 NTSP30990 170 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 METAP1P53582 386 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 RPS11P62280 158 aaKnown RBP eCLIP13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 SLC7A9P82251 487 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 TMEM215Q68D42 235 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 MRM1Q6IN84 353 aaKnown RBP13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 ETV3LQ6ZN32 361 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 PGAP1Q75T13 922 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 NR4A3Q92570 626 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 HS6ST2Q96MM7 605 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 ZNF559Q9BR84 538 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 SLITRK2Q9H156 845 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 BCL2L10Q9HD36 194 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 ANKRD10Q9NXR5 420 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 WDFY3Q8IZQ1 3526 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 SCN3AQ9NY46 2000 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 A0A087WV48 116 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 H7BY64 318 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 BCL2L11O43521 198 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 TBX6O95947 436 aaPredicted RBP13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 SSR2P43308 183 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 PNLIPRP2P54317 469 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 GLT8D1Q68CQ7 371 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 TMPRSS12Q86WS5 348 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 SDR9C7Q8NEX9 313 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 PRAP1Q96NZ9 151 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 RSRP1Q9BUV0 290 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 TSPAN10Q9H1Z9 355 aaPredicted RBP13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 APMAPQ9HDC9 416 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 INPP5EQ9NRR6 644 aa13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 NOP16Q9Y3C1 178 aaKnown RBP13.49□□□□□ -0.25
NCKIPSD-204ENST00000416649 LOC100509620A0A075B734 347 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 A0A1W2PPE3 182 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 BHLHE40O14503 412 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 GATCO43716 136 aaKnown RBP13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 RPP14O95059 124 aaKnown RBP13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 CD3DP04234 171 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 CSN2P05814 226 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 TAS2R38P59533 333 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 FNDC3BQ53EP0 1204 aaKnown RBP13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 NUDT13Q86X67 352 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 DCUN1D3Q8IWE4 304 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 KCNRGQ8N5I3 272 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 EID2Q8N6I1 236 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR1J4Q8NGS1 313 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 FIBINQ8TAL6 211 aa13.48□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR7D2Q96RA2 312 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms