RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PRRT1Q99946 306 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM82A0PJX8 343 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM189-UBE2V1I3L0A0 370 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 NTN1O95631 604 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 SERPINA7P05543 415 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 C8orf82Q6P1X6 216 aaPredicted RBP11.94□□□□□ -0.5
SCN1B-202ENST00000415950 LCTLQ6UWM7 567 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM184AQ6ZMB5 413 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 LIX1LQ8IVB5 337 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 SULF2Q8IWU5 870 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 OR51D1Q8NGF3 324 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 OR10R2Q8NGX6 335 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ELP4Q96EB1 424 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM43Q9BTV4 400 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 NDUFB11Q9NX14 153 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ABRACLQ9P1F3 81 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 UNCXA6NJT0 531 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 GFYI3L273 518 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 STK17BO94768 372 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 SLCO2B1O94956 709 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 SNAPINO95295 136 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 RAB3AP20336 220 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 SERPINA2P20848 420 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 WNT3P56703 355 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 EXOSC2Q13868 293 aaKnown RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 HEPHL1Q6MZM0 1159 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 GLB1L2Q8IW92 636 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 LRRC56Q8IYG6 542 aaPredicted RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 SUMF2Q8NBJ7 301 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 LIN37Q96GY3 246 aaPredicted RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 ST6GAL2Q96JF0 529 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 SCN3AQ9NY46 2000 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 CCSO14618 274 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 HMGB3O15347 200 aaKnown RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 LCMT2O60294 686 aaKnown RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 EIF4EP06730 217 aaKnown RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 IL32P24001 234 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 RPS18P62269 152 aaKnown RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 FOXK2Q01167 660 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 GDF7Q7Z4P5 450 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 RDH10Q8IZV5 341 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 OR52I2Q8NH67 350 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 PELOQ9BRX2 385 aaKnown RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 EHFQ9NZC4 300 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 M0QYG6 137 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 FOXE1O00358 373 aaPredicted RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 ITGB2P05107 769 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 GABRB1P18505 474 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 SNRPGP62308 76 aaKnown RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 SIRPAP78324 504 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 MRPS10P82664 201 aaKnown RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 TNK1Q13470 666 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 STK11Q15831 433 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 MAST2Q6P0Q8 1798 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 HTR3DQ70Z44 454 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 SVBPQ8N300 66 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 RADILQ96JH8 1075 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 MS4A8Q9BY19 250 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 AUNIPQ9H7T9 357 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 NCDNQ9UBB6 729 aa11.93□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF443Q9Y2A4 671 aaPredicted RBP11.93□□□□□ -0.5
SCN1B-202ENST00000415950 E9PI62 339 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 H3BNC9 293 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 SRPX2O60687 465 aaPredicted RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 DPM1O60762 260 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 INHBBP09529 407 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 CRABP1P29762 137 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 SELENOVP59797 346 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 MALLQ13021 153 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 PEA15Q15121 130 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 LAIR1Q6GTX8 287 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 FAM83HQ6ZRV2 1179 aaPredicted RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 OR9A4Q8NGU2 314 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 POC1BQ8TC44 478 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 ISG20Q96AZ6 181 aaKnown RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 SERINC2Q96SA4 455 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 CPEB1Q9BZB8 566 aaKnown RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM100Q9NV29 134 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 H3BUI4 141 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 UBL4AP11441 157 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 C5AR1P21730 350 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 P2RY2P41231 377 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 MAGEB1P43366 347 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 TAS2R19P59542 299 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 CDK3Q00526 305 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 FAM26EQ8N5C1 309 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 PARP12Q9H0J9 701 aaKnown RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 ASIC5Q9NY37 505 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 KLHL42Q9P2K6 505 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 ARFGEF1Q9Y6D6 1849 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 H3BQ06 376 aaPredicted RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 CPMP14384 443 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 POU3F1Q03052 451 aaPredicted RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 EBPQ15125 230 aaKnown RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 SLC25A35Q3KQZ1 300 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 HIST2H3PS2Q5TEC6 136 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 CMTM1Q8IZ96 169 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 IL22RA1Q8N6P7 574 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 MALSU1Q96EH3 234 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 TSSK2Q96PF2 358 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms