RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 RNASE6Q93091 150 aaKnown RBP10.57□□□□□ -0.72
ATG4B-207ENST00000415107 LRRC46Q96FV0 321 aa10.57□□□□□ -0.72
ATG4B-207ENST00000415107 BOD1Q96IK1 185 aa10.57□□□□□ -0.72
ATG4B-207ENST00000415107 OR10A4Q9H209 315 aa10.57□□□□□ -0.72
ATG4B-207ENST00000415107 DENND2DQ9H6A0 471 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-207ENST00000415107 ELOVL5Q9NYP7 299 aa10.57□□□□□ -0.72
ATG4B-207ENST00000415107 C6orf203Q9P0P8 240 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-207ENST00000415107 SEC14L4Q9UDX3 406 aa10.57□□□□□ -0.72
ATG4B-207ENST00000415107 NOSIPQ9Y314 301 aaKnown RBP10.57□□□□□ -0.72
ATG4B-207ENST00000415107 SAMHD1Q9Y3Z3 626 aaKnown RBP10.57□□□□□ -0.72
ATG4B-207ENST00000415107 AP4S1Q9Y587 144 aa10.57□□□□□ -0.72
ATG4B-207ENST00000415107 COL12A1Q99715 3063 aa10.57□□□□□ -0.72
ATG4B-207ENST00000415107 USP9YO00507 2555 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-207ENST00000415107 SPTAN1Q13813 2472 aaKnown RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 EFCAB9A8MZ26 197 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 PDLIM1O00151 329 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 CDC42EP2O14613 210 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 OR10H3O60404 316 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 HPRP00739 348 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 HIST1H2ABP04908 130 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 ADORA3P0DMS8 318 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 SAGP10523 405 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 COX5AP20674 150 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 MAKP20794 623 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 PTNP21246 168 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 DNAJA1P31689 397 aaKnown RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 NTF4P34130 210 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 GSSP48637 474 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 RPL18Q07020 188 aaKnown RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 TSPAN31Q12999 210 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 STK11Q15831 433 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 ATP6AP1Q15904 470 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 MICAQ29983 383 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 C1QTNF12Q5T7M4 302 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 PGBD2Q6P3X8 592 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 ZNF474Q6S9Z5 364 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 TBPL2Q6SJ96 375 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 CD300LDQ6UXZ3 194 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 Q6ZT83 130 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 BEND4Q6ZU67 534 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 HIST3H2AQ7L7L0 130 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 NUFIP2Q7Z417 695 aaKnown RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 HDDC2Q7Z4H3 204 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 GPAT4Q86UL3 456 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 GABRG1Q8N1C3 465 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 C10orf53Q8N6V4 93 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 LRRC17Q8N6Y2 441 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 CLDN22Q8N7P3 220 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 LRRC75AQ8NAA5 344 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 POMGNT2Q8NAT1 580 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 OR52J3Q8NH60 311 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 HIST1H2ACQ93077 130 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 APH1AQ96BI3 265 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 DNAJA3Q96EY1 480 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 LRR1Q96L50 414 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 ADAD1Q96M93 576 aaKnown RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 ZNF385AQ96PM9 386 aaKnown RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 DGCR6LQ9BY27 220 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 LINC00470Q9BZP3 86 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 VNN3Q9NY84 501 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 STX18Q9P2W9 335 aaKnown RBP10.56□□□□□ -0.72
ATG4B-207ENST00000415107 CLEC4AQ9UMR7 237 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 SIGLEC7Q9Y286 467 aa10.56□□□□□ -0.72
ATG4B-207ENST00000415107 CLOCKO15516 846 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 PTP4A3O75365 173 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 MRPL33O75394 65 aaKnown RBP10.55□□□□□ -0.72
ATG4B-207ENST00000415107 CCNB2O95067 398 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 OR6A2O95222 327 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 ADAP00813 363 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 APEHP13798 732 aaKnown RBP10.55□□□□□ -0.72
ATG4B-207ENST00000415107 PSMB1P20618 241 aaKnown RBP10.55□□□□□ -0.72
ATG4B-207ENST00000415107 FASP25445 335 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 SIRPAP78324 504 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 POU3F1Q03052 451 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-207ENST00000415107 KPNB1Q14974 876 aaKnown RBP10.55□□□□□ -0.72
ATG4B-207ENST00000415107 P2RY6Q15077 328 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 ZBED5Q49AG3 693 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 FBXW9Q5XUX1 488 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 FAM205BPQ63HN1 556 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 RPL13AP3Q6NVV1 102 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 SSX8Q7RTT4 187 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 OAFQ86UD1 273 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 LSRQ86X29 649 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-207ENST00000415107 TMEM123Q8N131 208 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 OR6X1Q8NH79 312 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 DNAJC9Q8WXX5 260 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 FAM46AQ96IP4 442 aaKnown RBP10.55□□□□□ -0.72
ATG4B-207ENST00000415107 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
ATG4B-207ENST00000415107 BDH2Q9BUT1 245 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 OSBPL10Q9BXB5 764 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 NDEL1Q9GZM8 345 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 ENKD1Q9H0I2 346 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 NTN4Q9HB63 628 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 SLC24A3Q9HC58 644 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 MGAT4BQ9UQ53 548 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 HCFC1P51610 2035 aa10.55□□□□□ -0.72
ATG4B-207ENST00000415107 FAM90A27PA6NNH2 459 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 EEF1E1-BLOC1S5C9J1V9 151 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 RPL36A-HNRNPH2H7BZ11 118 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 EEF1E1O43324 174 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms