RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 FGFBP1Q14512 234 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 GANABQ14697 944 aaKnown RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 QPRTQ15274 297 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 SEC23BQ15437 767 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ZNF141Q15928 474 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ACSM6Q6P461 480 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 XKRXQ6PP77 449 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ENPP6Q6UWR7 440 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ZNF836Q6ZNA1 936 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 MSANTD1Q6ZTZ1 278 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 EIF3MQ7L2H7 374 aaKnown RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 P4HA3Q7Z4N8 544 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CPLX4Q7Z7G2 160 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 DHDDSQ86SQ9 333 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 GGNQ86UU5 652 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 GRAMD2AQ8IUY3 354 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 LACC1Q8IV20 430 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 PM20D2Q8IYS1 436 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 EID3Q8N140 333 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 OR8H2Q8N162 312 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 RELL2Q8NC24 303 aaPredicted RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 CPEB3Q8NE35 698 aaKnown RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 TOR1AIP2Q8NFQ8 470 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 NFKBIDQ8NI38 313 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 GPR119Q8TDV5 335 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 SLC38A5Q8WUX1 472 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 C10orf82Q8WW14 230 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ASB5Q8WWX0 329 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 FIG4Q92562 907 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CNOT9Q92600 299 aaKnown RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 INTS12Q96CB8 462 aaKnown RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 TMEM19Q96HH6 336 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 WWC2-AS2Q96NR7 200 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 PIGQQ9BRB3 760 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 SLC39A3Q9BRY0 314 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 PINK1Q9BXM7 581 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 NMUR2Q9GZQ4 415 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 SAP30LQ9HAJ7 183 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ARMCX1Q9P291 453 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 P2RX2Q9UBL9 471 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 MGAT4CQ9UBM8 478 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ICAM5Q9UMF0 924 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CLEC4AQ9UMR7 237 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ABCA12Q86UK0 2595 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CSMD1Q96PZ7 3565 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 PDZD2O15018 2839 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 A0A087WZY1 265 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 TRBV5-3A0A0A0MS03 114 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 IGHV3-15A0A0B4J1V0 119 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 A0A0J9YW62 118 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 LOC100653049A0A140TA62 436 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 SLC22A20A6NK97 555 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 EEF1E1-BLOC1S5C9J1V9 151 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 C5orf58C9J3I9 102 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 AP4M1O00189 453 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 FBP2O00757 339 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 EEF1E1O43324 174 aaKnown RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 ATP8B1O43520 1251 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 CXCL13O43927 109 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 TMCC2O75069 709 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 KRT34O76011 436 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 TFPTP0C1Z6 253 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 ZCCHC18P0CG32 403 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 TMIGD3P0DMS9 266 aaPredicted RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 PRG2P13727 222 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 PRF1P14222 555 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 CPN1P15169 458 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 IL7RP16871 459 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 ZNF17P17021 662 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 KLK2P20151 261 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 PTNP21246 168 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 PSMA4P25789 261 aaKnown RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 LCN1P31025 176 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 CPOXP36551 454 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 RAD52P43351 418 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 SLC6A8P48029 635 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 GNGT1P63211 74 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 KCNJ10P78508 379 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 ARF1P84077 181 aaKnown RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 HOXC5Q00444 222 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 TFF3Q07654 80 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 MERTKQ12866 999 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 KLF10Q13118 480 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 PON3Q15166 354 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 RGNQ15493 299 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 SGCBQ16585 318 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 TMEM44Q2T9K0 475 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 LRIF1Q5T3J3 769 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 GCNT6Q5T4J0 391 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 MRPL2Q5T653 305 aaKnown RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 RIPPLY2Q5TAB7 128 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 NSUN5P2Q63ZY6 315 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 REP15Q6BDI9 236 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 VWA1Q6PCB0 445 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 SLC22A25Q6T423 547 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 DLEU7Q6UYE1 221 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 MEX3BQ6ZN04 569 aaKnown RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 LRRC74BQ6ZQY2 392 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 CHMP1BQ7LBR1 199 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 MTERF4Q7Z6M4 381 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms