RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NME2P1O60361 137 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 ADAM11O75078 769 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 TRIM3O75382 744 aaPredicted RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 SNX4O95219 450 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 APOL3O95236 402 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 P04436 131 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 CNR1P21554 472 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 NME2P22392 152 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 RNF144AP50876 292 aaPredicted RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 C17orf67Q0P5P2 114 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 TMEM44Q2T9K0 475 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 PGGHGQ32M88 737 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 MRPL2Q5T653 305 aaKnown RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 PRAMEF20Q5VT98 475 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 AADACL4Q5VUY2 407 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 CBLN3Q6UW01 205 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 RANBP3LQ86VV4 465 aaPredicted RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 CADM3Q8N126 398 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 ZADH2Q8N4Q0 377 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 CLDN22Q8N7P3 220 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 WDSUB1Q8N9V3 476 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 FAM83FQ8NEG4 500 aaPredicted RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 TM9SF4Q92544 642 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 CNOT9Q92600 299 aaKnown RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 SLC35B4Q969S0 331 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 KCTD12Q96CX2 325 aaKnown RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 KCNS3Q9BQ31 491 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 HES7Q9BYE0 225 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 BARHL1Q9BZE3 327 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 METTL7AQ9H8H3 244 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 MED17Q9NVC6 651 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 DNAJB12Q9NXW2 375 aaKnown RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 KLRF1Q9NZS2 232 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 ZNF229Q9UJW7 825 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 ICAM5Q9UMF0 924 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 SSR3Q9UNL2 185 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 SLC35A3Q9Y2D2 325 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 EXOSC1Q9Y3B2 195 aaKnown RBP9.01□□□□□ -0.97
DDB1-202ENST00000414411 WIF1Q9Y5W5 379 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 CDH10Q9Y6N8 788 aa9.01□□□□□ -0.97
DDB1-202ENST00000414411 CTDSP2O14595 271 aa9□□□□□ -0.97
DDB1-202ENST00000414411 CDC42EP2O14613 210 aa9□□□□□ -0.97
DDB1-202ENST00000414411 ZNF264O43296 627 aa9□□□□□ -0.97
DDB1-202ENST00000414411 EIF4E2O60573 245 aaKnown RBP9□□□□□ -0.97
DDB1-202ENST00000414411 PTTG1O95997 202 aa9□□□□□ -0.97
DDB1-202ENST00000414411 CSTAP01040 98 aa9□□□□□ -0.97
DDB1-202ENST00000414411 FAM87AP0C7U9 286 aa9□□□□□ -0.97
DDB1-202ENST00000414411 LIMS3P0CW19 117 aa9□□□□□ -0.97
DDB1-202ENST00000414411 LIMS4P0CW20 117 aa9□□□□□ -0.97
DDB1-202ENST00000414411 HTR2AP28223 471 aa9□□□□□ -0.97
DDB1-202ENST00000414411 GTF2E2P29084 291 aaKnown RBP9□□□□□ -0.97
DDB1-202ENST00000414411 ACAA2P42765 397 aaKnown RBP9□□□□□ -0.97
DDB1-202ENST00000414411 CDH11P55287 796 aa9□□□□□ -0.97
DDB1-202ENST00000414411 FOXO1Q12778 655 aa9□□□□□ -0.97
DDB1-202ENST00000414411 SKP2Q13309 424 aa9□□□□□ -0.97
DDB1-202ENST00000414411 INPP5JQ15735 1006 aaPredicted RBP9□□□□□ -0.97
DDB1-202ENST00000414411 NDUFAF6Q330K2 333 aa9□□□□□ -0.97
DDB1-202ENST00000414411 OR2G6Q5TZ20 316 aa9□□□□□ -0.97
DDB1-202ENST00000414411 Q6ZS92 163 aa9□□□□□ -0.97
DDB1-202ENST00000414411 MISPQ8IVT2 679 aa9□□□□□ -0.97
DDB1-202ENST00000414411 SULF2Q8IWU5 870 aa9□□□□□ -0.97
DDB1-202ENST00000414411 RBMXL3Q8N7X1 1067 aaKnown RBP9□□□□□ -0.97
DDB1-202ENST00000414411 ZNF614Q8N883 585 aa9□□□□□ -0.97
DDB1-202ENST00000414411 GATSQ8NAP1 163 aa9□□□□□ -0.97
DDB1-202ENST00000414411 PHOSPHO1Q8TCT1 267 aa9□□□□□ -0.97
DDB1-202ENST00000414411 RFKQ969G6 155 aa9□□□□□ -0.97
DDB1-202ENST00000414411 ITPKCQ96DU7 683 aa9□□□□□ -0.97
DDB1-202ENST00000414411 TMEM41AQ96HV5 264 aa9□□□□□ -0.97
DDB1-202ENST00000414411 PRSS27Q9BQR3 290 aa9□□□□□ -0.97
DDB1-202ENST00000414411 SLC30A2Q9BRI3 323 aa9□□□□□ -0.97
DDB1-202ENST00000414411 TEX12Q9BXU0 123 aa9□□□□□ -0.97
DDB1-202ENST00000414411 LAT2Q9GZY6 243 aa9□□□□□ -0.97
DDB1-202ENST00000414411 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9□□□□□ -0.97
DDB1-202ENST00000414411 ISYNA1Q9NPH2 558 aa9□□□□□ -0.97
DDB1-202ENST00000414411 KRCC1Q9NPI7 259 aaPredicted RBP9□□□□□ -0.97
DDB1-202ENST00000414411 EXOSC3Q9NQT5 275 aaKnown RBP9□□□□□ -0.97
DDB1-202ENST00000414411 SDHAF3Q9NRP4 125 aa9□□□□□ -0.97
DDB1-202ENST00000414411 CHCHD3Q9NX63 227 aaKnown RBP9□□□□□ -0.97
DDB1-202ENST00000414411 TP53TG5Q9Y2B4 290 aa9□□□□□ -0.97
DDB1-202ENST00000414411 HRH3Q9Y5N1 445 aa9□□□□□ -0.97
DDB1-202ENST00000414411 SPIN1Q9Y657 262 aaPredicted RBP9□□□□□ -0.97
DDB1-202ENST00000414411 TRAV17A0A0B4J275 112 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 TRAPPC13A5PLN9 417 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 LOC110117498-PIK3R3F6TDL0 507 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 G3V3Y1 287 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 CH25HO95992 272 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 TSPAN19P0C672 248 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 UBL4AP11441 157 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 PRG2P13727 222 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 DNASE1L1P49184 302 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 RORCP51449 518 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 ZNF117Q03924 483 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 TPBGQ13641 420 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 COL28A1Q2UY09 1125 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 ZNF766Q5HY98 468 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 TIGD3Q6B0B8 471 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 OR5M10Q6IEU7 315 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 SHFQ7M4L6 423 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 GALNTL5Q7Z4T8 443 aa8.99□□□□□ -0.97
DDB1-202ENST00000414411 EXD3Q8N9H8 876 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms