RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 OR2T7P0C7T2 308 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 CTNNB1P35222 781 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 ZNF660Q6AZW8 331 aaPredicted RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 RPL22L1Q6P5R6 122 aaKnown RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 TMED4Q7Z7H5 227 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 OR2T27Q8NH04 317 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 ADAT1Q9BUB4 502 aaKnown RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 PTDSS2Q9BVG9 487 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 OPN4Q9UHM6 478 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 KIF25Q9UIL4 384 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 GTF2A1LQ9UNN4 478 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 C19orf53Q9UNZ5 99 aaPredicted RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 MYO9BQ13459 2157 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 A0A1W2PQU0 124 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 RP2O75695 350 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 AQP2P41181 271 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 SQSTM1Q13501 440 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 LIN54Q6MZP7 749 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 POMZP3Q6PJE2 187 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 TMEM205Q6UW68 189 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 RNF113BQ8IZP6 322 aaKnown RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 ZNF524Q96C55 264 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 NARS2Q96I59 477 aaKnown RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 WDR13Q9H1Z4 485 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 TCF7L1Q9HCS4 588 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 FRRS1LQ9P0K9 344 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 IKZF2Q9UKS7 526 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 TBX21Q9UL17 535 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 ICAM5Q9UMF0 924 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 IFNGP01579 166 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 HIST1H2ABP04908 130 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 GABRA1P14867 456 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 MST1P26927 711 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 IGFALSP35858 605 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 RAG2P55895 527 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 ACTC1P68032 377 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 ACTA1P68133 377 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 TFF2Q03403 129 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 CST6Q15828 149 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 FAM69AQ5T7M9 428 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 LIPNQ5VXI9 398 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 GSG1LQ6UXU4 331 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 HIST3H2AQ7L7L0 130 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 LSM14AQ8ND56 463 aaKnown RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 FAM71CQ8NEG0 241 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 HIST1H2ACQ93077 130 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 GAL3ST3Q96A11 431 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 SPACA7Q96KW9 195 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 PITHD1Q9GZP4 211 aaPredicted RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 SAV1Q9H4B6 383 aaPredicted RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 LRIT1Q9P2V4 623 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 SLC27A6Q9Y2P4 619 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 HRH3Q9Y5N1 445 aa13.32□□□□□ -0.28
SEMA3F-202ENST00000413852 WDR87Q6ZQQ6 2873 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 M0QYG6 137 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 NDUFB6O95139 128 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 CD3DP04234 171 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 THBS1P07996 1170 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 GIPP09681 153 aaPredicted RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 RPS4Y1P22090 263 aaKnown RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 LSSP48449 732 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 IKZF1Q13422 519 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 ETFDHQ16134 617 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 C4orf46Q504U0 113 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 PRRT3Q5FWE3 981 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 OR6V1Q8N148 313 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 WFIKKN2Q8TEU8 576 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 TNFAIP8L1Q8WVP5 186 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 MRPS24Q96EL2 167 aaKnown RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 AIFM2Q9BRQ8 373 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 SRMSQ9H3Y6 488 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 PFDN2Q9UHV9 154 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 BAIAP2Q9UQB8 552 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 ZNF281Q9Y2X9 895 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 ARHGEF17Q96PE2 2063 aaPredicted RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 TRAV18A0A075B6X5 111 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 CTDSPLO15194 276 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 B3GALT2O43825 422 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 SLC35G6P0C7Q6 338 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 ART1P52961 327 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 MAT1AQ00266 395 aaKnown RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 ARHGAP11AQ6P4F7 1023 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 TICRRQ7Z2Z1 1910 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 BVESQ8NE79 360 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 SEC22AQ96IW7 307 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 OR2A5Q96R48 311 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 AMELYQ99218 206 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 C7orf50Q9BRJ6 194 aaKnown RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 EVA1AQ9H8M9 152 aa13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 PHPT1Q9NRX4 125 aaPredicted RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 DNAJB12Q9NXW2 375 aaKnown RBP13.31□□□□□ -0.28
SEMA3F-202ENST00000413852 BRINP1O60477 761 aa13.3□□□□□ -0.28
SEMA3F-202ENST00000413852 CTNSO60931 367 aa13.3□□□□□ -0.28
SEMA3F-202ENST00000413852 GTF2F2P13984 249 aa13.3□□□□□ -0.28
SEMA3F-202ENST00000413852 CD53P19397 219 aa13.3□□□□□ -0.28
SEMA3F-202ENST00000413852 DIO1P49895 249 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms