RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 I3L1I5 382 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 I3L521 148 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SGK1O00141 431 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CACNB4O00305 520 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MRASO14807 208 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 PGRMC2O15173 223 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 STX7O15400 261 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SSX5O60225 188 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CST8O60676 142 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SEC22BO75396 215 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 VPS26AO75436 327 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GPX5O75715 221 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SRP72O76094 671 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 AP2A2O94973 939 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MPC2O95563 127 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 LGI1O95970 557 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 NPPAP01160 153 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 IFNB1P01574 187 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MT-ND2P03891 347 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 IFNA4P05014 189 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CHRNGP07510 517 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 FAM157CP0CG43 387 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 IFI30P13284 250 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 HLA-EP13747 358 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 POU2F1P14859 743 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 HPGDP15428 266 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CD36P16671 472 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SPI1P17947 270 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 IL1RNP18510 177 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 KDELR1P24390 212 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MYL9P24844 172 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ELAVL4P26378 380 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RBMS1P29558 406 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SPRP35270 261 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MAGEB1P43366 347 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MAP2K4P45985 399 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 NSFP46459 744 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 BRCC3P46736 316 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GCLMP48507 274 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GSK3BP49841 420 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ATXN3P54252 364 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 HSPA2P54652 639 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 AIF1P55008 147 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 HUNKP57058 714 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RAB25P57735 213 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 DNAJB13P59910 316 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RRAS2P62070 204 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 BTG1P62324 171 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CSNK2BP67870 215 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 DHODHQ02127 395 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ABRQ12979 859 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 MRPL28Q13084 256 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SRSF9Q13242 221 aaKnown RBP eCLIP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 RIGQ13278 110 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SGCGQ13326 291 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 BTN1A1Q13410 526 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 PPA1Q15181 289 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 STXBP2Q15833 593 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 KYAT1Q16773 422 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 HFEQ30201 348 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF528Q3MIS6 628 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 C2CD6Q53TS8 623 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ARMCX4Q5H9R4 360 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 NHLRC3Q5JS37 347 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CELF3Q5SZQ8 465 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 PRAMEF8Q5VWM4 474 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 KCTD11Q693B1 232 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF470Q6ECI4 717 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ELP2Q6IA86 826 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GLYATQ6IB77 296 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CAPN13Q6MZZ7 669 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 PSRC1Q6PGN9 363 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLC25A47Q6Q0C1 308 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TMEM207Q6UWW9 146 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ALKAL1Q6UXT8 129 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZYG11AQ6WRX3 759 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 UTS2BQ765I0 119 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 FCRLAQ7L513 359 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 EFL1Q7Z2Z2 1120 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 COX8CQ7Z4L0 72 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 HSD17B13Q7Z5P4 300 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 COMMD7Q86VX2 200 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 DAW1Q8N136 415 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GPC2Q8N158 579 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 UBE2J2Q8N2K1 259 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SVOPLQ8N434 492 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 CERS5Q8N5B7 392 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TMEM99Q8N816 258 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 LRTM2Q8N967 370 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLC37A3Q8NCC5 494 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 KBTBD8Q8NFY9 601 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 OR8H1Q8NGG4 311 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 OR4C15Q8NGM1 316 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 OR2T11Q8NH01 316 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 OR6S1Q8NH40 331 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 APOBEC4Q8WW27 367 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 SUSD6Q92537 303 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 FCGR1BQ92637 280 aa2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 GTF3AQ92664 365 aaKnown RBP2.09□□□□□ -2.07
HMGB3P2-201ENST00000411913 TMBIM1Q969X1 311 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms