RNA–Protein interactions for RNA: ENST00000411034.1

SNORA40.8-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.8-201ENST00000411034 FOXC2Q99958 501 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 OMDQ99983 421 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 RIOK1Q9BRS2 568 aaKnown RBP0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 NDFIP1Q9BT67 221 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 CHAC1Q9BUX1 264 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 EDEM2Q9BV94 578 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 RIOK2Q9BVS4 552 aaKnown RBP0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 CAPS2Q9BXY5 557 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 ULBP2Q9BZM5 246 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 KRT23Q9C075 422 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 ACTR6Q9GZN1 396 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 POLR1EQ9GZS1 481 aaKnown RBP0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 RSPH9Q9H1X1 276 aaPredicted RBP0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 C1orf21Q9H246 121 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 SPNS1Q9H2V7 528 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 IFI27L2Q9H2X8 130 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 RBKSQ9H477 322 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 RPP21Q9H633 154 aaKnown RBP0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 REEP4Q9H6H4 257 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 COQ10BQ9H8M1 238 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 DBNDD1Q9H9R9 158 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 SIAEQ9HAT2 523 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 UGT1A7Q9HAW7 530 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 UGT1A10Q9HAW8 530 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 UGT1A8Q9HAW9 530 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 LY9Q9HBG7 655 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 NOX3Q9HBY0 568 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 RAB18Q9NP72 206 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 IL26Q9NPH9 171 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 CTPS2Q9NRF8 586 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 THUMPD1Q9NXG2 353 aaKnown RBP0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 QPCTLQ9NXS2 382 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 CALYQ9NYX4 217 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 IL36GQ9NZH8 169 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 XCL2Q9UBD3 114 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 PCSK1NQ9UHG2 260 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 PCYOX1Q9UHG3 505 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 GGA2Q9UJY4 613 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 ZNF222Q9UK12 451 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 MMP17Q9ULZ9 603 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 CHMP2BQ9UQN3 213 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 TRAF3IP3Q9Y228 551 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 POLDIP2Q9Y2S7 368 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 MEMO1Q9Y316 297 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 OR10H1Q9Y4A9 318 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 SLC25A15Q9Y619 301 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 RFNGQ9Y644 331 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 U3KQV3 271 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 COL27A1Q8IZC6 1860 aaPredicted RBP0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 WDR62O43379 1518 aa0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 COL5A1P20908 1838 aaPredicted RBP0.22□□□□□ -2.37
SNORA40.8-201ENST00000411034 TNS2Q63HR2 1409 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 GPR179Q6PRD1 2367 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 YEATS2Q9ULM3 1422 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 TET2Q6N021 2002 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 GPRASP1Q5JY77 1395 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 CEMIPQ8WUJ3 1361 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 ATP8B3O60423 1300 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 SHANK1Q9Y566 2161 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 IGLV3-12A0A075B6K2 115 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 IGKV1D-13A0A0B4J2D9 117 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 IGHV5-10-1A0A0J9YXX1 117 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 A0A1B0GVI7 797 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 A0A1W2PP18 115 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 TCRBV9S1A1TA0A576 114 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 MBLAC1A4D2B0 266 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 OR5B21A6NL26 309 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 ZNF726A6NNF4 738 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 C12orf71A8MTZ7 269 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 A8MUU9 505 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 VGLL3A8MV65 326 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 A8MXQ7 604 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 F5H6K3 240 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 INS-IGF2F8WCM5 200 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 H0YHG0 523 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 PRRG1O14668 218 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 XPO1O14980 1071 aaKnown RBP0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 MAPK13O15264 365 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 RGS16O15492 202 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 RBFOX2O43251 390 aaKnown RBP eCLIP0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 ZNF207O43670 478 aaKnown RBP0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 RAMP3O60896 148 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 UPK3AO75631 287 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 CCNKO75909 580 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 ATP5LO75964 103 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 DIRAS1O95057 198 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 MFN2O95140 757 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 RCBTB2O95199 551 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 OXSR1O95747 527 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 AP2A1O95782 977 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 C6orf47O95873 294 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 KLK3P07288 261 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 ADRA2AP08913 450 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 GNAO1P09471 354 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 ZDHHC11BP0C7U3 371 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 LINC00869P0C866 280 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 GKN3PP0CG01 181 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 TSPY4P0CV99 314 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 TSPY10P0CW01 314 aa0.21□□□□□ -2.38
SNORA40.8-201ENST00000411034 SMIM10L1P0DMW3 83 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms