RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 EXD3Q8N9H8 876 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 NFAM1Q8NET5 270 aaPredicted RBP12.33□□□□□ -0.44
LIMS1-205ENST00000410093 ZMYND19Q96E35 227 aaPredicted RBP12.33□□□□□ -0.44
LIMS1-205ENST00000410093 PGLYRP3Q96LB9 341 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 OR6C1Q96RD1 312 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 NMNAT3Q96T66 252 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 LPAR4Q99677 370 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 ALG12Q9BV10 488 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 WDR54Q9H977 334 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 SDHAF3Q9NRP4 125 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 ABRACLQ9P1F3 81 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 ADAM18Q9Y3Q7 739 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 SEC16AO15027 2179 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 FER1L5A0AVI2 2057 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 MPDZO75970 2070 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 RP1P56715 2156 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 LY6G6EA0A0G2JKS1 128 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TEX13CA0A0J9YWL9 993 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 ANKUB1A6NFN9 424 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 CENPBD1B2RD01 187 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 IDSB3KWA1 339 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 PDCD5O14737 125 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 SNPHO15079 494 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 CPNE3O75131 537 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 NPIPB7O75200 414 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF432O94892 652 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 IGHMP01871 453 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 BGLAPP02818 100 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 FGF5P12034 268 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 MST1P26927 711 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 APOBEC1P41238 236 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 RPS5P46782 204 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 EMP2P54851 167 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 EGR3Q06889 387 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 ACSM3Q53FZ2 586 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 BAIAP2L2Q6UXY1 529 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 B3GLCTQ6Y288 498 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 GDPD3Q7L5L3 318 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 FAM220AQ7Z4H9 259 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 MARCH3Q86UD3 253 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 OR5J2Q8NH18 312 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 GPR119Q8TDV5 335 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 GHSRQ92847 366 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 ZCCHC4Q9H5U6 513 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 PPP1R3EQ9H7J1 279 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 KLHL1Q9NR64 748 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 SLC22A11Q9NSA0 550 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TAS2R10Q9NYW0 307 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 COMMD3Q9UBI1 195 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 CTSFQ9UBX1 484 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 SIRT4Q9Y6E7 314 aaPredicted RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 U3KQA8 63 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 PI4KAP42356 2102 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TMED7-TICAM2A0A0A6YYA0 188 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 XKRYO14609 159 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 CDX4O14627 284 aaPredicted RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 NUDT14O95848 222 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TFP02787 698 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 GYPBP06028 91 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 FKBP2P26885 142 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 GDI2P50395 445 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 EFNA3P52797 238 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 SLC3A1Q07837 685 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 QPRTQ15274 297 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 PYDC2Q56P42 97 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 YIF1BQ5BJH7 314 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 LINC01590Q5TEZ4 76 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 PRAMEF17Q5VTA0 474 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TRIQKQ629K1 86 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF385CQ66K41 422 aaPredicted RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 MZT2BQ6NZ67 158 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TMEM205Q6UW68 189 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 UNQ9370/PRO34162Q6UXP9 181 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 APCDD1LQ8NCL9 501 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 LSM14AQ8ND56 463 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 C19orf18Q8NEA5 215 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 OR6K6Q8NGW6 343 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 HTRA1Q92743 480 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TAAR8Q969N4 342 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 KTI12Q96EK9 354 aaPredicted RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 PELI1Q96FA3 418 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 Q96M85 177 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 MOGAT1Q96PD6 335 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 RNF32Q9H0A6 362 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 MARCH7Q9H992 704 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 POLE4Q9NR33 117 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 MRPL39Q9NYK5 338 aaKnown RBP12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TEKT2Q9UIF3 430 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 FBXL4Q9UKA2 621 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TMED7Q9Y3B3 224 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 FKBP7Q9Y680 259 aa12.32□□□□□ -0.44
LIMS1-205ENST00000410093 TRBV2A0A0J9YWF9 115 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 A0A1W2PQM1 296 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 LRRN3E7EW58 273 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 TM4SF5O14894 197 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms