RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PHOSPHO2Q8TCD6 241 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 NETO1Q8TDF5 533 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 PRRT1Q99946 306 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 MMP27Q9H306 513 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 MAGIXQ9H6Y5 334 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 TMEM9BQ9NQ34 198 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ZCWPW2A0A1B0GU75 182 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 CDK2AP1O14519 115 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ZNF264O43296 627 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 NCR1O76036 304 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 PMP2P02689 132 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 CHRNB1P11230 501 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 OR5I1Q13606 314 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 GAREM2Q75VX8 874 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 RBM12BQ8IXT5 1001 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 MRPL43Q8N983 215 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 KRBA1A5PL33 1030 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ABCD4O14678 606 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 PTGESO14684 152 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ZNF749O43361 778 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 SMAD6O43541 496 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 SRPX2O60687 465 aaPredicted RBP10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 AADACP22760 399 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 DNAJB1P25685 340 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 NUDT1P36639 197 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 MAGEB1P43366 347 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ATP4BP51164 291 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ERVPABLB-1P60509 514 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 GALEQ14376 348 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 TIFABQ6ZNK6 161 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ZNF417Q8TAU3 575 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ZFPM2Q8WW38 1151 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ASB11Q8WXH4 323 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 GMLQ99445 158 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 PLSCR3Q9NRY6 295 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 OSGIN2Q9Y236 505 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 KDM3BQ7LBC6 1761 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 PRKYO43930 277 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 PRKACAP17612 351 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 CLDN8P56748 225 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 C17orf67Q0P5P2 114 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 TANGO2Q6ICL3 276 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 CLEC14AQ86T13 490 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 SLCO2A1Q92959 643 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 ZNF778Q96MU6 729 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 STYXL1Q9Y6J8 313 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 DOCK9Q9BZ29 2069 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 YKT6O15498 198 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 NUDT9Q9BW91 350 aa10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 NMNAT1Q9HAN9 279 aaPredicted RBP10.44□□□□□ -0.74
PRPF40A-202ENST00000410080 MEIOCA2RUB1 952 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 F6UZH7 168 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 ALOX12BO75342 701 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 UBCP0CG48 685 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 AHRP35869 848 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 LTBQ06643 244 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 RTL8BQ17RB0 113 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 RTL6Q6ICC9 239 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 FYTTD1Q96QD9 318 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 CACNG6Q9BXT2 260 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 BLACEA4D250 179 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 H0YGG7 62 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 WNT7BP56706 349 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 HBG1P69891 147 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 HBG2P69892 147 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 LETMD1Q6P1Q0 360 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 C17orf99Q6UX52 265 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 DEFB108BQ8NET1 73 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 CA5BP1Q8WTZ4 195 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 CLEC1BQ9P126 229 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 HTR1EP28566 365 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 MGAT3Q09327 533 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 TMEM64Q6YI46 380 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 CCDC28AQ8IWP9 274 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 OR10J5Q8NHC4 309 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 ZPBPQ9BS86 351 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 NLKQ9UBE8 527 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 UTS2O95399 124 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 OSMP13725 252 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 MEF2DQ14814 521 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 PHLDA2Q53GA4 152 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 H2BFWTQ7Z2G1 175 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 YRDCQ86U90 279 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 LINC00346Q8IVM7 164 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 BARHL1Q9BZE3 327 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 A0A1B0GTW7 788 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 SLC5A10A0PJK1 596 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 ONECUT2O95948 504 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 CSF1P09603 554 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 EIF2DP41214 584 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 CTC1Q2NKJ3 1217 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 HNRNPA1L2Q32P51 320 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 CNIH2Q6PI25 160 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 FRMD1Q8N878 549 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 SHISA4Q96DD7 197 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 LIN7BQ9HAP6 207 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 CTBSQ01459 385 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 OR7G3Q8NG95 312 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 TCTEX1D2Q8WW35 142 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms