RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 FREM3P0C091 2139 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF17P17021 662 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CCNA2P20248 432 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 NOS3P29474 1203 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 DSCR4P56555 118 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 MFSD13AQ14CX5 517 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF239Q16600 458 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 GLYR1Q49A26 553 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 METTL11BQ5VVY1 283 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 GPR107Q5VW38 600 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 TIGD3Q6B0B8 471 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 C3orf33Q6P1S2 294 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 POMZP3Q6PJE2 187 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 C19orf48Q6RUI8 117 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 MDGA2Q7Z553 956 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 IGFN1Q86VF2 1251 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CADM3Q8N126 398 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 GTPBP8Q8N3Z3 284 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 EXD3Q8N9H8 876 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF485Q8NCK3 441 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 NPEPL1Q8NDH3 523 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ADPRHL1Q8NDY3 354 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 PROKR2Q8NFJ6 384 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 OR4K17Q8NGC6 315 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 FNDC8Q8TC99 324 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 RAB2BQ8WUD1 216 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SLC25A43Q8WUT9 341 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SNX18Q96RF0 628 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 FUNDC2Q9BWH2 189 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 MND1Q9BWT6 205 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 OR11A1Q9GZK7 315 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SACM1LQ9NTJ5 587 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 EXOSC1Q9Y3B2 195 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CORINQ9Y5Q5 1042 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 BLOC1S5-TXNDC5H3BN57 136 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 PLPP3O14495 311 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 TSC22D2O75157 780 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 IL11P20809 199 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 CFL1P23528 166 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 GRPRP30550 384 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 IDUAP35475 653 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 RPL4P36578 427 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 CYB561P49447 251 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ST13P50502 369 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 SLC25A1P53007 311 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 NHLH1Q02575 133 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 SELENBP1Q13228 472 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 CRTC2Q53ET0 693 aaPredicted RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 GPR139Q6DWJ6 353 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ALKBH2Q6NS38 261 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 C10orf53Q8N6V4 93 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 TEX19Q8NA77 164 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 PSD4Q8NDX1 1056 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 OR52E2Q8NGJ4 325 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 OR1J4Q8NGS1 313 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 C12orf43Q96C57 262 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 INTS12Q96CB8 462 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ARL5BQ96KC2 179 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 TSPAN32Q96QS1 320 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 NAA50Q9GZZ1 169 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 MED20Q9H944 212 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 MRPS18CQ9Y3D5 142 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 SPIN1Q9Y657 262 aaPredicted RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 TNRC6AQ8NDV7 1962 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 MED13Q9UHV7 2174 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 A0A1W2PNV4 684 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 LRRC3CA6NJW4 275 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 LIPT2A6NK58 231 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 NOTOA8MTQ0 251 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 CBR3O75828 277 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 NEURL1O76050 574 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 P04436 131 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 HIST1H2ABP04908 130 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 LIMS3P0CW19 117 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 LIMS4P0CW20 117 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 PAICSP22234 425 aaKnown RBP4.97□□□□□ -1.61
EPHA4-202ENST00000409854 LIPAP38571 399 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ETV1P50549 477 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 CTXN1P60606 82 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ERVK-25P63136 954 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 TGIF1Q15583 401 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 CTF1Q16619 201 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 TIGD6Q17RP2 521 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 MESTQ5EB52 335 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 SLC35D3Q5M8T2 416 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 HIST3H2AQ7L7L0 130 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 SDR9C7Q8NEX9 313 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF519Q8TB69 540 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 THAP4Q8WY91 577 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 HIST1H2ACQ93077 130 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 RASD2Q96D21 266 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 OR5M11Q96RB7 305 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 TEAD3Q99594 435 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ASPNQ9BXN1 380 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 SCPEP1Q9HB40 452 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ISYNA1Q9NPH2 558 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 KLHL1Q9NR64 748 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 SERINC1Q9NRX5 453 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 ALKBH4Q9NXW9 302 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 H2AFY2Q9P0M6 372 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms