RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 DVL2O14641 736 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 NCR1O76036 304 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 OR6A2O95222 327 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 PRKCAP17252 672 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 CDONQ4KMG0 1287 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 DDI2Q5TDH0 399 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 FAM198BQ6UWH4 519 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 METTL7AQ9H8H3 244 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 INIPQ9NRY2 104 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 PPP4R1LQ9P1A2 415 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 NCDNQ9UBB6 729 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 COPS3Q9UNS2 423 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 VDAC3Q9Y277 283 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 UGT2A1Q9Y4X1 527 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 SHISA3A0PJX4 238 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 ARHGEF9O43307 516 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 ZNF883P0CG24 379 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 TGM1P22735 817 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 GRPRP30550 384 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 PCOLCEQ15113 449 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 DMKNQ6E0U4 476 aaPredicted RBP18.73■□□□□ 0.59
USP39-203ENST00000409470 C5orf46Q6UWT4 87 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 EXD3Q8N9H8 876 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 ZNF511Q8NB15 262 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 OR10G3Q8NGC4 313 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 OR2T4Q8NH00 348 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 ABHD4Q8TB40 342 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 THAP4Q8WY91 577 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 PELI1Q96FA3 418 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 WDR70Q9NW82 654 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 RHBDL2Q9NX52 303 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 AKAP7Q9P0M2 348 aaPredicted RBP18.73■□□□□ 0.59
USP39-203ENST00000409470 LOC102723996A0A087X1L8 192 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 XKRYO14609 159 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 OR2T1O43869 369 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 SNX4O95219 450 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 PLGP00747 810 aaPredicted RBP18.73■□□□□ 0.59
USP39-203ENST00000409470 HSF2Q03933 536 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 ANGPT1Q15389 498 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 LYPD8Q6UX82 237 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 GALNT6Q8NCL4 622 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 CMKLR1Q99788 373 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 ST6GALNAC2Q9UJ37 374 aa18.73■□□□□ 0.59
USP39-203ENST00000409470 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 UMODP07911 640 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 CCDC157Q569K6 752 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 ARSKQ6UWY0 536 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 CEACAM19Q7Z692 300 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 POC5Q8NA72 575 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 ELP5Q8TE02 316 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 SNRNP27Q8WVK2 155 aaKnown RBP18.72■□□□□ 0.59
USP39-203ENST00000409470 GHSRQ92847 366 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 PGLYRP3Q96LB9 341 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 RASL10BQ96S79 203 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 CCDC32Q9BV29 185 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 MIXL1Q9H2W2 232 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 SDHAF3Q9NRP4 125 aa18.72■□□□□ 0.59
USP39-203ENST00000409470 A0A1W2PRG6 482 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 SLC35F4A4IF30 521 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 B4DXG7 233 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 FLRT2O43155 660 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 FBXO45P0C2W1 286 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 APOBEC1P41238 236 aaKnown RBP18.71■□□□□ 0.59
USP39-203ENST00000409470 MTNR1BP49286 362 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 SIRPAP78324 504 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 SLC6A19Q695T7 634 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 SLC16A9Q7RTY1 509 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 RNF138Q8WVD3 245 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 NPAS1Q99742 590 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 SYT4Q9H2B2 425 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 CCDC86Q9H6F5 360 aaKnown RBP18.71■□□□□ 0.59
USP39-203ENST00000409470 ACOXLQ9NUZ1 547 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 ETAA1Q9NY74 926 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 COMMD3Q9UBI1 195 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 PCDHGB2Q9Y5G2 931 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 V9GYH0 126 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 IGHV1-45A0A0A0MS14 117 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 DCTN6O00399 190 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 DXOO77932 396 aaKnown RBP18.71■□□□□ 0.59
USP39-203ENST00000409470 CDK5R1Q15078 307 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 DBX2Q6ZNG2 339 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 OR6V1Q8N148 313 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 OR8H2Q8N162 312 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 MS4A15Q8N5U1 240 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 ZNF417Q8TAU3 575 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 DIRAS2Q96HU8 199 aa18.71■□□□□ 0.59
USP39-203ENST00000409470 ZNF587Q96SQ5 575 aaPredicted RBP18.71■□□□□ 0.59
USP39-203ENST00000409470 SDHCQ99643 169 aaPredicted RBP18.71■□□□□ 0.59
USP39-203ENST00000409470 B4E171 279 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 PLPP3O14495 311 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 OGG1O15527 345 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 KLF7O75840 302 aaPredicted RBP18.7■□□□□ 0.58
USP39-203ENST00000409470 MYL9P24844 172 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 EDNRAP25101 427 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 MSX1P28360 303 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 SHC1P29353 583 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 TSPAN7P41732 249 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 GDI2P50395 445 aaKnown RBP18.7■□□□□ 0.58
USP39-203ENST00000409470 ZNF41P51814 821 aaPredicted RBP18.7■□□□□ 0.58
USP39-203ENST00000409470 RPL27P61353 136 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms