RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TAS2R16Q9NYV7 291 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 FBXO24O75426 580 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 F13BP05160 661 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 PAX6P26367 422 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 PXNP49023 591 aaPredicted RBP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 SLC9A3R2Q15599 337 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 HLA-CQ95604 372 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 SEMA6CQ9H3T2 930 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 PGAP2Q9UHJ9 254 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 PCDHGA5Q9Y5G8 931 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 PUS1Q9Y606 427 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 LRIT2A6NDA9 550 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 RGS11O94810 467 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 OMGP23515 440 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 FCRLAQ7L513 359 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 CPXM2Q8N436 756 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 GPR26Q8NDV2 337 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 OR1S2Q8NGQ3 325 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 HSD17B8Q92506 261 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 BOD1Q96IK1 185 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 PIGQQ9BRB3 760 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 BABAM2Q9NXR7 383 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF140P52738 457 aaPredicted RBP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 RPL22L1Q6P5R6 122 aaKnown RBP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 TMEM178AQ8NBL3 297 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 SMAP2Q8WU79 429 aaPredicted RBP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 KATNB1Q9BVA0 655 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 ADAM23O75077 832 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 SLC30A7Q8NEW0 376 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 WDR76Q9H967 626 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 CALHM2Q9HA72 323 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 ACSS1Q9NUB1 689 aaPredicted RBP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 CACNA1DQ01668 2161 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 PTGESO14684 152 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 FADS1O60427 444 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 DPP4P27487 766 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 EIF1P41567 113 aaKnown RBP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 GTF2H4Q92759 462 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 GFOD1Q9NXC2 390 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 LRP5LA4QPB2 252 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 OR2T7P0C7T2 308 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 PTAFRP25105 342 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 IL34Q6ZMJ4 242 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 OR1E3Q8WZA6 343 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 AQP9O43315 295 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 POU4F3Q15319 338 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 BEX5Q5H9J7 111 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 KCTD12Q96CX2 325 aaKnown RBP11.2□□□□□ -0.62
SMCR8-201ENST00000406438 MACROD1Q9BQ69 325 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 KCNIP2Q9NS61 270 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 VAPAQ9P0L0 249 aa11.2□□□□□ -0.62
SMCR8-201ENST00000406438 CCR7P32248 378 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 OR1D4P47884 311 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 RAC1P63000 192 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 MOKQ9UQ07 419 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 C4orf47A7E2U8 309 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 EIF1BO60739 113 aaKnown RBP11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ABHD16AO95870 558 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 NDUFA6P56556 154 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 FXNQ16595 210 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 MFSD9Q8NBP5 474 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 KCND3Q9UK17 655 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 NXT1Q9UKK6 140 aaKnown RBP11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ACTL7AQ9Y615 435 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 GLB1P16278 677 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ENPP1P22413 925 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 FOXA1P55317 472 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 C15orf39Q6ZRI6 1047 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF486Q96H40 463 aaPredicted RBP11.19□□□□□ -0.62
SMCR8-201ENST00000406438 GPR45Q9Y5Y3 372 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 AKAP6Q13023 2319 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 H0YGG7 62 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 SPINT2O43291 252 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 GPX3P22352 226 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 GABRA4P48169 554 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 SMAD2Q15796 467 aaKnown RBP11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ADGRG5Q8IZF4 528 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 EGLN1Q9GZT9 426 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 MED17Q9NVC6 651 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 SPHK1Q9NYA1 384 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 COPS3Q9UNS2 423 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ETV7Q9Y603 341 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 TRAF3IP2O43734 574 aaPredicted RBP11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF865P0CJ78 1059 aaPredicted RBP11.19□□□□□ -0.62
SMCR8-201ENST00000406438 MAGEB1P43366 347 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 LRRC56Q8IYG6 542 aaPredicted RBP11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF454Q8N9F8 522 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 OR13C2Q8NGS9 318 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 FAM213BQ8TBF2 198 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF597Q96LX8 424 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 NIPSNAP3BQ9BS92 247 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ABHD6Q9BV23 337 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 FN3KRPQ9HA64 309 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 AAED1Q7RTV5 226 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 LRRTM3Q86VH5 581 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 MRPL43Q8N983 215 aaKnown RBP11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ASB11Q8WXH4 323 aa11.19□□□□□ -0.62
SMCR8-201ENST00000406438 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms