RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HCFC1P51610 2035 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 CXCL6P80162 114 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 CHRNB3Q05901 458 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 SCRN3Q0VDG4 424 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 OXA1LQ15070 435 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 MAPRE2Q15555 327 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 SNCBQ16143 134 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 SGCAQ16586 387 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 QRICH1Q2TAL8 776 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 SLC22A10Q63ZE4 541 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 TMEM220Q6QAJ8 160 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 CXCL17Q6UXB2 119 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 USP50Q70EL3 339 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 PGAP1Q75T13 922 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 SCD5Q86SK9 330 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 NUDCD3Q8IVD9 361 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 C12orf56Q8IXR9 622 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 TPRX1Q8N7U7 411 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 SLC38A4Q969I6 547 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 ZNF707Q96C28 371 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 MSANTD3Q96H12 275 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 SEC22AQ96IW7 307 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 TECTBQ96PL2 329 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 ALS2CR12Q96Q35 445 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 KLHDC3Q9BQ90 382 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 BPIFA3Q9BQP9 254 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 C9orf16Q9BUW7 83 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 RBKSQ9H477 322 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 PLEKHG2Q9H7P9 1386 aa3.74□□□□□ -1.81
HMGB1P13-201ENST00000406019 DHRS7CA6NNS2 312 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR2F2O95006 317 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 SERPIND1P05546 499 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 STAG3L3P0CL85 134 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 PNMA6AP0CW24 399 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 PGAM2P15259 253 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 IL12AP29459 219 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 GCKP35557 465 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 RAB9AP51151 201 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 PSMD7P51665 324 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 KPNA2P52292 529 aaKnown RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 PLK1P53350 603 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 IST1P53990 364 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 PKNOX1P55347 436 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 C21orf59P57076 290 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 DSCR10P59022 87 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 KCNJ2P63252 427 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 UBE2IP63279 158 aaKnown RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 MS4A2Q01362 244 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 SLC10A7Q0GE19 358 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 MAB21L1Q13394 359 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR5I1Q13606 314 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 SERTAD2Q14140 314 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 GNMTQ14749 295 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 PRR4Q16378 134 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 KYAT1Q16773 422 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 SBK1Q52WX2 424 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 PAN3Q58A45 887 aaKnown RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR52E8Q6IFG1 317 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 C2orf66Q6UXQ4 117 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 LRRC31Q6UY01 552 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 TMCO2Q7Z6W1 182 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 ERI1Q8IV48 349 aaKnown RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 NAXDQ8IW45 347 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 MFSD6LQ8IWD5 586 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 SKA3Q8IX90 412 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 TCAIMQ8N3R3 496 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 RASL10AQ92737 203 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 TSG101Q99816 390 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 SOSTQ9BQB4 213 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 FAIM2Q9BWQ8 316 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 MRPL47Q9HD33 250 aaKnown RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 INPP5EQ9NRR6 644 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 THUMPD1Q9NXG2 353 aaKnown RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 GCNT4Q9P109 453 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 VANGL2Q9ULK5 521 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 PLLPQ9Y342 182 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 RPL36Q9Y3U8 105 aaKnown RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 INSRP06213 1382 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 ROCK1Q13464 1354 aa3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 COL5A2P05997 1499 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P13-201ENST00000406019 ZBED9Q6R2W3 1325 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 C1orf232A0A0U1RR37 186 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR5B21A6NL26 309 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 GOLGA8JA6NMD2 632 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 SRRM5B3KS81 715 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 GOLGA8TH3BQL2 631 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 DLGAP1O14490 977 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 PHF1O43189 567 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 GPAA1O43292 621 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 TRAPPC3O43617 180 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR7A10O76100 309 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 OXSR1O95747 527 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 UBTFL6P0CB48 400 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 GOLGA8HP0CJ92 632 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 ACLYP53396 1101 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 VBP1P61758 197 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 MERTKQ12866 999 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 ASAH1Q13510 395 aa3.72□□□□□ -1.81
HMGB1P13-201ENST00000406019 CHRNA6Q15825 494 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms