RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZNF548Q8NEK5 533 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 STXBP6Q8NFX7 210 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 NUBPLQ8TB37 319 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 MS4A10Q96PG2 267 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 LHPPQ9H008 270 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 WDR54Q9H977 334 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 ARMC1Q9NVT9 282 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 PAK1IP1Q9NWT1 392 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 C1orf109Q9NX04 203 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 TESMINQ9Y4I5 508 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 H3BMQ9 156 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 SLC9A3R1O14745 358 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 EMC8O43402 210 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 FADS2O95864 444 aaKnown RBP5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 RAB40ALP0C0E4 278 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 ELFN1P0C7U0 828 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 ENGP17813 658 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 BLKP51451 505 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 AP1S1P61966 158 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 ESRRGP62508 458 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 HPCAP84074 193 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 VLDLRP98155 873 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 ALKBH1Q13686 389 aaKnown RBP5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 C6orf226Q5I0X4 101 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 TMEM236Q5W0B7 351 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 GRHL2Q6ISB3 625 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 QSOX2Q6ZRP7 698 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 SSX9Q7RTT3 188 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 TRIM69Q86WT6 500 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR9G4Q8NGQ1 327 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR2A12Q8NGT7 310 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR14L1PQ8NHC6 308 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 UCN3Q969E3 161 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 PIGTQ969N2 578 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 SFXN2Q96NB2 322 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR10A5Q9H207 317 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 PLXNA4Q9HCM2 1894 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 POLE4Q9NR33 117 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 TAS2R16Q9NYV7 291 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 STMN3Q9NZ72 180 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 PTTG2Q9NZH5 202 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 OARD1Q9Y530 152 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 SNX11Q9Y5W9 270 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 SCN2AQ99250 2005 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 TRAV19A0A0A6YYK7 116 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 A0A1W2PPQ1 181 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 A0A1W2PS29 197 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 PRSS37A4D1T9 235 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 CBY3A6NI87 242 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 RNASEK-C17orf49H0YIS7 233 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 TPST2O60704 377 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 NXPH2O95156 264 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 GGT1P19440 569 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 GCSHP23434 173 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 HLA-DMAP28067 261 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 TGFBR2P37173 567 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 PSMD8P48556 350 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 ATP4BP51164 291 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 SNRPD1P62314 119 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 ARF6P62330 175 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 MVKQ03426 396 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 GAB1Q13480 694 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 GANABQ14697 944 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 TRAM2Q15035 370 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 KIAA0040Q15053 153 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 VAMP3Q15836 100 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 LYSMD4Q5XG99 296 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 MRPL21Q7Z2W9 205 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 ZNF546Q86UE3 836 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 IGFN1Q86VF2 1251 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 LRRC17Q8N6Y2 441 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 ECHDC3Q96DC8 303 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 HARBI1Q96MB7 349 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR4K3Q96R72 315 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 MBOAT4Q96T53 435 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 CSF3RQ99062 836 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 CMKLR1Q99788 373 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 MCRIP2Q9BUT9 160 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 ALOXE3Q9BYJ1 711 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 POPDC3Q9HBV1 291 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 HEBP1Q9NRV9 189 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 PIPOXQ9P0Z9 390 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 TSSC4Q9Y5U2 329 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 MYO10Q9HD67 2058 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 PCDH7O60245 1069 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 DEAF1O75398 565 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 PRKRAO75569 313 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 CRYABP02511 175 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 ALPLP05186 524 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 HTR1AP08908 422 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 HOXB5P09067 269 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 FURINP09958 794 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 SMIM10L1P0DMW3 83 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 DBTP11182 482 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 PSMB9P28065 219 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 TNFRSF4P43489 277 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 SPINT3P49223 89 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 RPS13P62277 151 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 NAAAQ02083 359 aa5.64□□□□□ -1.51
TRAPPC13-202ENST00000399438 TATDN3Q17R31 274 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms