RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 C6orf203Q9P0P8 240 aaPredicted RBP11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 DNAJB9Q9UBS3 223 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TMEM5Q9Y2B1 443 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MAGED1Q9Y5V3 778 aaPredicted RBP11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ALPK2Q86TB3 2170 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NKX2-6A6NCS4 301 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FAM90A27PA6NNH2 459 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 EFCAB9A8MZ26 197 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 C11orf98E9PRG8 122 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HNRNPRO43390 633 aaKnown RBP11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR10H3O60404 316 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PTP4A3O75365 173 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CCNB2O95067 398 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 VAMP5O95183 116 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PLGP00747 810 aaPredicted RBP11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GASTP01350 101 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ADORA3P0DMS8 318 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OPRM1P35372 400 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TFF3Q07654 80 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GTF2IRD2BQ6EKJ0 949 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TMEM225Q6GV28 225 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF474Q6S9Z5 364 aaPredicted RBP11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 THSD4Q6ZMP0 1018 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NANOGNBQ7Z5D8 188 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GPAT4Q86UL3 456 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GTF2IRD2Q86UP8 949 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR51A7Q8NH64 312 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ASB5Q8WWX0 329 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TMEM45BQ96B21 275 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TXNDC15Q96J42 360 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TNFRSF13CQ96RJ3 184 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PKP2Q99959 881 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OPN3Q9H1Y3 402 aaPredicted RBP11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 C12orf49Q9H741 205 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 YY1AP1Q9H869 796 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PLSCR4Q9NRQ2 329 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 COQ3Q9NZJ6 369 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TMCC3Q9ULS5 477 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SIGLEC7Q9Y286 467 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 EMC9Q9Y3B6 208 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SPTBN1Q01082 2364 aaKnown RBP11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HCFC1P51610 2035 aa11□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ARRDC5A6NEK1 342 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 BLOC1S5-TXNDC5H3BN57 136 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GPR171O14626 319 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 DVL2O14641 736 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 DEAF1O75398 565 aaPredicted RBP10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF432O94892 652 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TP53P04637 393 aaPredicted RBP10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 F13BP05160 661 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SAGP10523 405 aaPredicted RBP10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CD8BP10966 210 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FPR3P25089 353 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FASP25445 335 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 DNAJA1P31689 397 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR3A2P47893 321 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SLC9A3P48764 834 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SELENOPP49908 381 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 POU3F1Q03052 451 aaPredicted RBP10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 LGALS3BPQ08380 585 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GK3PQ14409 553 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TMEM201Q5SNT2 666 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 EEF1A1P5Q5VTE0 462 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 XKRXQ6PP77 449 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 RRM2BQ7LG56 351 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PXKQ7Z7A4 578 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GALNT5Q7Z7M9 940 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OAFQ86UD1 273 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IGFN1Q86VF2 1251 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 KIF18BQ86Y91 864 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF610Q8N9Z0 462 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 AQP11Q8NBQ7 271 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR10G2Q8NGC3 310 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NIPSNAP1Q9BPW8 284 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TACO1Q9BSH4 297 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 S100A14Q9HCY8 104 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MED29Q9NX70 200 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 EMC3Q9P0I2 261 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PRSS50Q9UI38 385 aa10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NOSIPQ9Y314 301 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB1-203ENST00000399082 UNC119BA6NIH7 251 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 A8MXE2 369 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 EEF1E1-BLOC1S5C9J1V9 151 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MCIDASD6RGH6 385 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GNGT2O14610 69 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 EEF1E1O43324 174 aaKnown RBP10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SMNDC1O75940 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CLDN14O95500 239 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CLDN1O95832 211 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HIST1H2ABP04908 130 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 POU2F1P14859 743 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF43P17038 809 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PRKACGP22612 351 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 AHCYP23526 432 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FOXG1P55316 489 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TSPAN31Q12999 210 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MELKQ14680 651 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SLC25A35Q3KQZ1 300 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FBXL19-AS1Q494R0 122 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms