RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 OR11A1Q9GZK7 315 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 NARFLQ9H6Q4 476 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 SLC25A22Q9H936 323 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 DAZ3Q9NR90 486 aaKnown RBP1.86□□□□□ -2.11
CD47-203ENST00000398258 MMP26Q9NRE1 261 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 GLRX2Q9NS18 164 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 ETNK2Q9NVF9 386 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 PISDQ9UG56 409 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 CTNNA3Q9UI47 895 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 IKZF2Q9UKS7 526 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 KCNIP3Q9Y2W7 256 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 CSDC2Q9Y534 153 aaKnown RBP1.86□□□□□ -2.11
CD47-203ENST00000398258 BTBD17A6NE02 478 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 USP27XA6NNY8 438 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 A8MUA0 341 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PANO1I0J062 215 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 SLC31A2O15432 143 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 NPIPB7O75200 414 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 SUPT7LO94864 414 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 KRT6AP02538 564 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 MCF2P10911 925 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 TDGF1P13385 188 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 FUT3P21217 361 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 HTR1EP28566 365 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PRDX3P30048 256 aaKnown RBP1.85□□□□□ -2.11
CD47-203ENST00000398258 CASP14P31944 242 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 CTRLP40313 264 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 TPMTP51580 245 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 TDGF1P3P51864 188 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PRMT2P55345 433 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 FBXW4P57775 412 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 RPS8P62241 208 aaKnown RBP1.85□□□□□ -2.11
CD47-203ENST00000398258 PSG7Q13046 419 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PLD1Q13393 1074 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 HERPUD1Q15011 391 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 MARCH8Q5T0T0 291 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 TMEM107Q6UX40 140 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 LRRC31Q6UY01 552 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 COX15Q7KZN9 410 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 ZNF546Q86UE3 836 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PLA2G4DQ86XP0 818 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PNKDQ8N490 385 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 Q8N7P7 452 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 FNDC5Q8NAU1 212 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 C20orf203Q8NBC4 194 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 SDR9C7Q8NEX9 313 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 OR2L5Q8NG80 312 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 OR10G9Q8NGN4 311 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 MYDGFQ969H8 173 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 TCEANC2Q96MN5 208 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PANX2Q96RD6 677 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 FMO2Q99518 471 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PLIN2Q99541 437 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 TSG101Q99816 390 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 GPR61Q9BZJ8 451 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 POLR2J2Q9GZM3 115 aaKnown RBP1.85□□□□□ -2.11
CD47-203ENST00000398258 ACTR6Q9GZN1 396 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 ILKAPQ9H0C8 392 aaPredicted RBP1.85□□□□□ -2.11
CD47-203ENST00000398258 POLR2J3Q9H1A7 115 aaKnown RBP1.85□□□□□ -2.11
CD47-203ENST00000398258 GBA3Q9H227 469 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 PLGRKTQ9HBL7 147 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 EXD2Q9NVH0 621 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 QPCTLQ9NXS2 382 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 HOXC10Q9NYD6 342 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 ADAM22Q9P0K1 906 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 XCL2Q9UBD3 114 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 SLC7A8Q9UHI5 535 aa1.85□□□□□ -2.11
CD47-203ENST00000398258 RAI1Q7Z5J4 1906 aaPredicted RBP1.84□□□□□ -2.11
CD47-203ENST00000398258 IGLV3-22A0A075B6J6 115 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 A0A0G2JLM5 398 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 A0A0G2JN53 185 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 WI2-2373I1.2A0A1W2PRP0 233 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 GOLGA8OA6NCC3 632 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 FAM47DPA6NHR8 397 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 ERVV-1B6SEH8 477 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 C12orf77C9JDV5 145 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 GOLGA8NF8WBI6 632 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 ZNF861PO60384 105 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 HMMRO75330 724 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 P04436 131 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 C2P06681 752 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 ICAM2P13598 275 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 ATP6V1B2P21281 511 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 CCNE1P24864 410 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 HSD17B2P37059 387 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 GSSP48637 474 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 KCNJ2P63252 427 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 BEX3Q00994 111 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 ARFRP1Q13795 201 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 CYTH1Q15438 398 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 NSDHLQ15738 373 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 NRF1Q16656 503 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 TMEM255AQ5JRV8 349 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 KDM7AQ6ZMT4 941 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 ZNF620Q6ZNG0 422 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 ZNF571Q7Z3V5 609 aaPredicted RBP1.84□□□□□ -2.11
CD47-203ENST00000398258 TMEM135Q86UB9 458 aa1.84□□□□□ -2.11
CD47-203ENST00000398258 RALGPS2Q86X27 583 aaPredicted RBP1.84□□□□□ -2.11
CD47-203ENST00000398258 SUMF2Q8NBJ7 301 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms