RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FAM222BQ8WU58 562 aa22.56■■□□□ 1.2
U2AF1-203ENST00000398137 ZNF775Q96BV0 537 aaPredicted RBP22.56■■□□□ 1.2
U2AF1-203ENST00000398137 ALPK1Q96QP1 1244 aa22.56■■□□□ 1.2
U2AF1-203ENST00000398137 YY1AP1Q9H869 796 aa22.56■■□□□ 1.2
U2AF1-203ENST00000398137 BCO1Q9HAY6 547 aa22.56■■□□□ 1.2
U2AF1-203ENST00000398137 MRPL39Q9NYK5 338 aaKnown RBP22.56■■□□□ 1.2
U2AF1-203ENST00000398137 ZNF229Q9UJW7 825 aa22.56■■□□□ 1.2
U2AF1-203ENST00000398137 B3GALT5Q9Y2C3 310 aa22.56■■□□□ 1.2
U2AF1-203ENST00000398137 SH3PXD2BA1X283 911 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 A6NNC1 897 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 TNFRSF11BO00300 401 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 FUT1P19526 365 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 MAKP20794 623 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 GPR4P46093 362 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 SLC16A1P53985 500 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 IL1RL1Q01638 556 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 PRKCDQ05655 676 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 PPP1R8Q12972 351 aaKnown RBP22.55■■□□□ 1.2
U2AF1-203ENST00000398137 SLC17A1Q14916 467 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 DAZAP2Q15038 168 aaPredicted RBP22.55■■□□□ 1.2
U2AF1-203ENST00000398137 PDK3Q15120 406 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 TMEM201Q5SNT2 666 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 NANOGNBQ7Z5D8 188 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 KDM8Q8N371 416 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 ADPRHL1Q8NDY3 354 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 OR9K2Q8NGE7 335 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 OR5J2Q8NH18 312 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 LINC01560Q8TB33 94 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 POLDIP3Q9BY77 421 aaKnown RBP22.55■■□□□ 1.2
U2AF1-203ENST00000398137 REEP1Q9H902 201 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 GP6Q9HCN6 339 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 EMC3Q9P0I2 261 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 TMCC3Q9ULS5 477 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 RASD1Q9Y272 281 aa22.55■■□□□ 1.2
U2AF1-203ENST00000398137 SAMHD1Q9Y3Z3 626 aaKnown RBP22.55■■□□□ 1.2
U2AF1-203ENST00000398137 IGKV3D-15A0A087WSY6 115 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 ANKRD65E5RJM6 399 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 TIPRLO75663 272 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 KRT36O76013 467 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 YES1P07947 543 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 ASAH2BP0C7U1 165 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 LIMS1P48059 325 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 IST1P53990 364 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 NUFIP2Q7Z417 695 aaKnown RBP22.54■■□□□ 1.2
U2AF1-203ENST00000398137 BTLAQ7Z6A9 289 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 OR4C15Q8NGM1 316 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 FAM46AQ96IP4 442 aaKnown RBP22.54■■□□□ 1.2
U2AF1-203ENST00000398137 TACO1Q9BSH4 297 aaKnown RBP22.54■■□□□ 1.2
U2AF1-203ENST00000398137 CLEC4MQ9H2X3 399 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-203ENST00000398137 DENND2DQ9H6A0 471 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-203ENST00000398137 C12orf49Q9H741 205 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 U3KQV3 271 aa22.54■■□□□ 1.2
U2AF1-203ENST00000398137 ZNF724A8MTY0 619 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 EFCAB9A8MZ26 197 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 PLPP3O14495 311 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 SMNDC1O75940 238 aaKnown RBP eCLIP22.53■■□□□ 1.2
U2AF1-203ENST00000398137 HPRP00739 348 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 HIST1H2ABP04908 130 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 SAGP10523 405 aaPredicted RBP22.53■■□□□ 1.2
U2AF1-203ENST00000398137 SORDQ00796 357 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 HIST3H2AQ7L7L0 130 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 LUZP2Q86TE4 346 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 OR6K3Q8NGY3 331 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 HIST1H2ACQ93077 130 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 STARD4Q96DR4 205 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 LRRC46Q96FV0 321 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 DUS3LQ96G46 650 aaKnown RBP22.53■■□□□ 1.2
U2AF1-203ENST00000398137 SF3B5Q9BWJ5 86 aaKnown RBP22.53■■□□□ 1.2
U2AF1-203ENST00000398137 GALNT8Q9NY28 637 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 B3GAT1Q9P2W7 334 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 TMEM5Q9Y2B1 443 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 FLVCR1Q9Y5Y0 555 aa22.53■■□□□ 1.2
U2AF1-203ENST00000398137 HTR3EA5X5Y0 456 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 TUBAL3A6NHL2 446 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 GNGT2O14610 69 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 OR10H3O60404 316 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 VAMP5O95183 116 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 EPXP11678 715 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 PUDPQ08623 228 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 LAPTM4AQ15012 233 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 CDC20BQ86Y33 519 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 CDK20Q8IZL9 346 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 OR13C2Q8NGS9 318 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 LIPHQ8WWY8 451 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 OXGR1Q96P68 337 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 RBM24Q9BX46 236 aaKnown RBP22.52■■□□□ 1.2
U2AF1-203ENST00000398137 KRCC1Q9NPI7 259 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-203ENST00000398137 PROCRQ9UNN8 238 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 AP4S1Q9Y587 144 aa22.52■■□□□ 1.2
U2AF1-203ENST00000398137 A8MXE2 369 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 C11orf98E9PRG8 122 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 MS4A18H0YCH9 400 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 GPR171O14626 319 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 OR6A2O95222 327 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 ADORA3P0DMS8 318 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 AHCYP23526 432 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 OMPP47874 163 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 HMGA2P52926 109 aa22.51■■□□□ 1.19
U2AF1-203ENST00000398137 C1DQ13901 141 aaKnown RBP22.51■■□□□ 1.19
U2AF1-203ENST00000398137 MS4A18Q3C1V0 323 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms