RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SYT13Q7L8C5 426 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PRR22Q8IZ63 422 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SYS1Q8N2H4 156 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF285Q96NJ3 590 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 OR8D2Q9GZM6 311 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NXF5Q9H1B4 397 aaKnown RBP16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF576Q9H609 170 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GALNT9Q9HCQ5 603 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PDE7BQ9NP56 450 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MRPL39Q9NYK5 338 aaKnown RBP16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 AUP1Q9Y679 476 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RP1P56715 2156 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 INMT-MINDY4F8WBC2 141 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NME1P15531 152 aaKnown RBP16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ARSBP15848 533 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CDKN2AP42771 156 aaKnown RBP16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RPS4XP62701 263 aaKnown RBP16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 LGALS3BPQ08380 585 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZSWIM7Q19AV6 140 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CFAP77Q6ZQR2 320 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 BRD7Q9NPI1 651 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 A0A087WV48 116 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 BLACEA4D250 179 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PRR32B1ATL7 298 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ORC5O43913 435 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 EPXP11678 715 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CD38P28907 300 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF511Q8NB15 262 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ADAMTS18Q8TE60 1221 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TSLPQ969D9 159 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZFP3Q96NJ6 502 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MCUBQ9NWR8 336 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PRODH2Q9UF12 536 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SPAG17Q6Q759 2223 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TP53BP1Q12888 1972 aaPredicted RBP16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 C17orf51A8MQB3 221 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ARPC3O15145 178 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SERPINA3P01011 423 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 F13BP05160 661 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MST1P26927 711 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SLC6A1P30531 599 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PER3P56645 1201 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GKN2Q86XP6 184 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TEX19Q8NA77 164 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF680Q8NEM1 530 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF578Q96N58 590 aaPredicted RBP16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 LRFN5Q96NI6 719 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SYNDIG1Q9H7V2 258 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 UBQLN4Q9NRR5 601 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NPFFR2Q9Y5X5 522 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CACNA1CQ13936 2221 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CDC14CA4D256 554 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 FLRT2O43155 660 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SLC43A1O75387 559 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CD3GP09693 182 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SDHBP21912 280 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 AHCYP23526 432 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GRK6P43250 576 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SLC37A1P57057 533 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 WBP2NLQ6ICG8 309 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MTFR2Q6P444 385 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NMNAT2Q9BZQ4 307 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NRSN2Q9GZP1 204 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 LMAN1LQ9HAT1 526 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NANSQ9NR45 359 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 DHCR7Q9UBM7 475 aaKnown RBP16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MTCH2Q9Y6C9 303 aa16.72■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TRAV1-2A0A0B4J238 106 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF254O75437 659 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CAPZA2P47755 286 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PRPS1P60891 318 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SKP2Q13309 424 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 COL13A1Q5TAT6 717 aaPredicted RBP16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 FNDC7Q5VTL7 733 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RPL22L1Q6P5R6 122 aaKnown RBP16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TEX261Q6UWH6 196 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ATG4DQ86TL0 474 aaPredicted RBP16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 FAM71CQ8NEG0 241 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GAL3ST4Q96RP7 486 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ADOQ96SZ5 270 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RTN4RQ9BZR6 473 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 LANCL2Q9NS86 450 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 U3KQ87 197 aa16.71■□□□□ 0.27
CHRFAM7A-202ENST00000397827 LILRA5A6NI73 299 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 ACOD1A6NK06 481 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 SCDO00767 359 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 EGR4Q05215 589 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 SERTAD2Q14140 314 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 ZNF74Q16587 644 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 LINC01590Q5TEZ4 76 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 PYHIN1Q6K0P9 492 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 C9orf62Q8N4C0 152 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 BMPERQ8N8U9 685 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 ALG12Q9BV10 488 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 ELF5Q9UKW6 265 aaPredicted RBP16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 UNC13CQ8NB66 2214 aa16.71■□□□□ 0.26
CHRFAM7A-202ENST00000397827 TLCD2A6NGC4 264 aa16.7■□□□□ 0.26
CHRFAM7A-202ENST00000397827 H7C1C5 153 aa16.7■□□□□ 0.26
CHRFAM7A-202ENST00000397827 LINC01387J3KSC0 135 aa16.7■□□□□ 0.26
CHRFAM7A-202ENST00000397827 ARL6IP5O75915 188 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms