RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 AMBNQ9NP70 447 aa17.48■□□□□ 0.39
PDLIM2-205ENST00000397761 MRPS18AQ9NVS2 196 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-205ENST00000397761 RPL36Q9Y3U8 105 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-205ENST00000397761 A0A0J9YW62 118 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 LOC102725191A0A1B0GVB3 256 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 EFCAB10A6NFE3 127 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 FAM166BA8MTA8 275 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 PTGES3LE9PB15 166 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 SULT2B1O00204 365 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 OR6A2O95222 327 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 CLPTM1O96005 669 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 OPN1LWP04000 364 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 TFAP2AP05549 437 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 CELA3AP09093 270 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 EEF1B2P24534 225 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 PLGLB1Q02325 96 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 ZNF91Q05481 1191 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 CRMP1Q14194 572 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 PAQR6Q6TCH4 344 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 CXXC5Q7LFL8 322 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 PXKQ7Z7A4 578 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 ZADH2Q8N4Q0 377 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 KDF1Q8NAX2 398 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 SLC37A3Q8NCC5 494 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 NPEPL1Q8NDH3 523 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 PTP4A1Q93096 173 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 RFKQ969G6 155 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 ADGRG7Q96K78 797 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 Q96M85 177 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 TXNIPQ9H3M7 391 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 ZDHHC11Q9H8X9 412 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 PCDHGB1Q9Y5G3 927 aa17.47■□□□□ 0.39
PDLIM2-205ENST00000397761 AQP7P3A6NL99 342 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 SNTNA6NMZ2 147 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 AKR7A3O95154 331 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 DBTP11182 482 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 SLC2A5P22732 501 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 PPIAP62937 165 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 RNFT1Q5M7Z0 435 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 NIPAL3Q6P499 406 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 PLBD1Q6P4A8 553 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 BORAQ6PGQ7 559 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 ESPNLQ6ZVH7 1005 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 AHSA2Q719I0 299 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 PRSS48Q7RTY5 328 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 GID4Q8IVV7 300 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 LSM14AQ8ND56 463 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 OR52E2Q8NGJ4 325 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 OR4K13Q8NH42 304 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 ZNF519Q8TB69 540 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 RELTQ969Z4 430 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 RASD2Q96D21 266 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 DCBLD2Q96PD2 775 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 SNX18Q96RF0 628 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 COPS4Q9BT78 406 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 HCAR1Q9BXC0 346 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 NMNAT2Q9BZQ4 307 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 B3GAT1Q9P2W7 334 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 ERVK-18Q9QC07 812 aa17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 PRRC2CQ9Y520 2896 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-205ENST00000397761 TEX13CA0A0J9YWL9 993 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 FAM183AA6NL82 134 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 PRR23D1E9PI22 279 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 M0R3G1 203 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 ACOT7O00154 380 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 ZZEF1O43149 2961 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 RNF13O43567 381 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 RGS10O43665 173 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 CDK1P06493 297 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 PRR23D2P0DMB1 279 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 ATP6V1B1P15313 513 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 HTR1FP30939 366 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 AGFG1P52594 562 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 TMPRSS3P57727 454 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 OR2B6P58173 313 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 RPL27P61353 136 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 CSNK2A1P68400 391 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 TMED1Q13445 227 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 SPARTQ8N0X7 666 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 ARIH2OSQ8N7S6 290 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 TMEM99Q8N816 258 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 FAM98AQ8NCA5 519 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 BBS1Q8NFJ9 593 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 MYDGFQ969H8 173 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 BATF3Q9NR55 127 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 GRHPRQ9UBQ7 328 aa17.45■□□□□ 0.38
PDLIM2-205ENST00000397761 C11orf98E9PRG8 122 aa17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 SEC14L5O43304 696 aa17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 EIF1BO60739 113 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 PAICSP22234 425 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 AHCYP23526 432 aa17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 CDKN2AP42771 156 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 LHX2P50458 406 aa17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 NR1H2P55055 460 aa17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 CDH11P55287 796 aa17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 CLDN15P56746 228 aa17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 CLDN20P56880 219 aa17.44■□□□□ 0.38
PDLIM2-205ENST00000397761 PIGFQ07326 219 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms