RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 TMEM5Q9Y2B1 443 aa17.49■□□□□ 0.39
PDLIM2-204ENST00000397760 SF3B6Q9Y3B4 125 aaKnown RBP17.49■□□□□ 0.39
PDLIM2-204ENST00000397760 MAKP20794 623 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 CXCR1P25024 350 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 CCL11P51671 97 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 ZNF41P51814 821 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 POLR2HP52434 150 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 CTBP2P56545 445 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 CRYZQ08257 329 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 GLYR1Q49A26 553 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 SPINK14Q6IE38 97 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 POMZP3Q6PJE2 187 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 SNIP1Q8TAD8 396 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 ST8SIA1Q92185 356 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 ARHGAP9Q9BRR9 750 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 PTGES2Q9H7Z7 377 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 IL20Q9NYY1 176 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 PLA2G3Q9NZ20 509 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 VDAC3Q9Y277 283 aa17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 SPIN1Q9Y657 262 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-204ENST00000397760 IGKV1D-42A0A075B6H8 117 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 CDC42EP2O14613 210 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 CDRT1O95170 752 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 WISP1O95388 367 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 TRAPPC2P0DI81 140 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 TRAPPC2BP0DI82 140 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 PRKCAP17252 672 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 GALP22466 123 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 HTR3AP46098 478 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 SCN1BQ07699 218 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 PAQR6Q6TCH4 344 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 TMPRSS11FQ6ZWK6 438 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 UBQLNLQ8IYU4 475 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 TMEM41AQ96HV5 264 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 JSRP1Q96MG2 331 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 TMEM43Q9BTV4 400 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 PLA2G12AQ9BZM1 189 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 SLC19A3Q9BZV2 496 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 NEURL1O76050 574 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 RPS5P46782 204 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 DNASE1L1P49184 302 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 ASAH1Q13510 395 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 ZNF79Q15937 498 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 ARMC4Q5T2S8 1044 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 DDI2Q5TDH0 399 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 ZNF485Q8NCK3 441 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 OR1J4Q8NGS1 313 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 SIGLEC12Q96PQ1 595 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 EGLN3Q9H6Z9 239 aa17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 ZNF552Q9H707 407 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 PLEKHB1Q9UF11 243 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 EXOGQ9Y2C4 368 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-204ENST00000397760 TMED7-TICAM2A0A0A6YYA0 188 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 TRDV1A0A1B0GX56 115 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 UNC119BA6NIH7 251 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 CDK2AP1O14519 115 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 HMGN1P05114 100 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 PTBP1P26599 531 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 ID4P47928 161 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 OR2B6P58173 313 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 GPR50Q13585 617 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 OR1C1Q15619 314 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 PLPPR5Q32ZL2 321 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 ADGRG3Q86Y34 549 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 LAX1Q8IWV1 398 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 OR8D4Q8NGM9 314 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 C1GALT1C1Q96EU7 318 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 GNRHR2Q96P88 292 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 NPAS1Q99742 590 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 C14orf119Q9NWQ9 140 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 TMED7Q9Y3B3 224 aa17.46■□□□□ 0.39
PDLIM2-204ENST00000397760 SPTBN2O15020 2390 aa17.46■□□□□ 0.38
PDLIM2-204ENST00000397760 A0A0G2JMM0 328 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 A0A1W2PPB8 328 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 A0A1W2PRS3 328 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 KIR3DP1A8MWS1 328 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 FAM47E-STBD1D6RA91 191 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 ETV2O00321 342 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 TRIM3O75382 744 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 SAGP10523 405 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 IL7P13232 177 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 FUT1P19526 365 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 CNR1P21554 472 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 DLX5P56178 289 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 FOXF1Q12946 379 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 MFAP5Q13361 173 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 NDUFA5Q16718 116 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 AADACL4Q5VUY2 407 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 TIGD3Q6B0B8 471 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 OR52N1Q8NH53 320 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 SGTBQ96EQ0 304 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 DOCK10Q96BY6 2186 aa17.45■□□□□ 0.38
PDLIM2-204ENST00000397760 SURF4O15260 269 aa17.44■□□□□ 0.38
PDLIM2-204ENST00000397760 SUSD5O60279 629 aa17.44■□□□□ 0.38
PDLIM2-204ENST00000397760 SLC25A12O75746 678 aa17.44■□□□□ 0.38
PDLIM2-204ENST00000397760 LIMS3P0CW19 117 aa17.44■□□□□ 0.38
PDLIM2-204ENST00000397760 LIMS4P0CW20 117 aa17.44■□□□□ 0.38
PDLIM2-204ENST00000397760 CFL1P23528 166 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-204ENST00000397760 APOBEC1P41238 236 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms