RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 RFTN2Q52LD8 501 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 BSPRYQ5W0U4 402 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 FAHD2BQ6P2I3 314 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 SPESP1Q6UW49 350 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.24□□□□□ -1.732e-8■■□□□ 11.7
GABPB1-204ENST00000396464 NUFIP2Q7Z417 695 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 UNC93AQ86WB7 457 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 TMEM219Q86XT9 240 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 APOBEC3FQ8IUX4 373 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 TMEM156Q8N614 296 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 ACER1Q8TDN7 264 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 PHF10Q8WUB8 498 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 CPNE4Q96A23 557 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 FAHD2AQ96GK7 314 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 RANBP9Q96S59 729 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 CHRNA10Q9GZZ6 450 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 MMP28Q9H239 520 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 OR51B6Q9H340 312 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 TRIM45Q9H8W5 580 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 SP140LQ9H930 580 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 PATZ1Q9HBE1 687 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 KRCC1Q9NPI7 259 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 IL36RNQ9UBH0 155 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 KCNS2Q9ULS6 477 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 FAF1Q9UNN5 650 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 KCNIP3Q9Y2W7 256 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 TARBP1Q13395 1621 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 ABCA5Q8WWZ7 1642 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 A0A1B0GTI1 187 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 A0A1B0GUA9 196 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TCRBV9S1A1TA0A576 114 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF814B7Z6K7 855 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GOLGA6L19H0YKK7 550 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 H3BMQ9 156 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 CLDN34H7C241 214 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 K7EN84 100 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TNFSF11O14788 317 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GAGE7O76087 117 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 OR7A10O76100 309 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 RAB3DO95716 219 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 IGKV2-30P06310 120 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GAGE12FP0CL80 117 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GAGE12GP0CL81 117 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GAGE12IP0CL82 117 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 IGHV4-30-4P0DP06 118 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 FASP25445 335 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 MSNP26038 577 aaKnown RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 HSD11B1P28845 292 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 RBM34P42696 430 aaKnown RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 RGS6P49758 472 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GNG10P50151 68 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 XKP51811 444 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TUBA4AP68366 448 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 LTBQ06643 244 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 C2orf80Q0P641 193 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TSPAN31Q12999 210 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GAGE1Q13065 139 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GAGE4Q13068 117 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 MED21Q13503 144 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TPBGQ13641 420 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 EIF2B1Q14232 305 aaKnown RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 LAGE3Q14657 143 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 PRTGQ2VWP7 1150 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TRMT5Q32P41 509 aaKnown RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 WASHC2DQ5SRD0 308 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TPRG1LQ5T0D9 272 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 ATP1A1-AS1Q5TC04 95 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TRNP1Q6NT89 227 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 ARMCX5Q6P1M9 558 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 GFRALQ6UXV0 394 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 CERS6Q6ZMG9 384 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 RTL4Q6ZR62 310 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TMEM25Q86YD3 366 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 C15orf54Q8N8G6 183 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF738Q8NE65 137 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF680Q8NEM1 530 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 SEMA6DQ8NFY4 1073 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 OR1S2Q8NGQ3 325 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 OR2L2Q8NH16 312 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 SETD7Q8WTS6 366 aaKnown RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 RPL36ALQ969Q0 106 aaKnown RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TMEM143Q96AN5 459 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 ZBTB9Q96C00 473 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 FAF2Q96CS3 445 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 CENPNQ96H22 339 aaPredicted RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 EPYCQ99645 322 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 RBBP8Q99708 897 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 OVOL2Q9BRP0 275 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 TIMM29Q9BSF4 260 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 NICN1Q9BSH3 213 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 RSG1Q9BU20 258 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF426Q9BUY5 554 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 AGPAT4Q9NRZ5 378 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 CD274Q9NZQ7 290 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 B4GALT7Q9UBV7 327 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 AGO1Q9UL18 857 aaKnown RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 RCL1Q9Y2P8 373 aaKnown RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 PRG3Q9Y2Y8 225 aaPredicted RBP4.23□□□□□ -1.73
GABPB1-204ENST00000396464 AUP1Q9Y679 476 aa4.23□□□□□ -1.73
GABPB1-204ENST00000396464 IGHV2-70DA0A0C4DH43 119 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms