RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TOMM34Q15785 309 aaPredicted RBP15.24■□□□□ 0.03
NUP50-202ENST00000396096 RHBDD2Q6NTF9 364 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 CDC20BQ86Y33 519 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 ZNF511Q8NB15 262 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 OR2T4Q8NH00 348 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 CCDC74AQ96AQ1 378 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 ZNF486Q96H40 463 aaPredicted RBP15.24■□□□□ 0.03
NUP50-202ENST00000396096 CMTM3Q96MX0 182 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 OR14A2Q96R54 314 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 ELF4Q99607 663 aaPredicted RBP15.24■□□□□ 0.03
NUP50-202ENST00000396096 SLC22A11Q9NSA0 550 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 ZNF281Q9Y2X9 895 aa15.24■□□□□ 0.03
NUP50-202ENST00000396096 FZD7O75084 574 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 PAHP00439 452 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 TACSTD2P09758 323 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 GP1BBP13224 206 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 HSD17B12Q53GQ0 312 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 YIF1BQ5BJH7 314 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 TMEM71Q6P5X7 295 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 RABEPKQ7Z6M1 372 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 UBE2J2Q8N2K1 259 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 RFT1Q96AA3 541 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 TSSK2Q96PF2 358 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 PDCD1LG2Q9BQ51 273 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 MARVELD1Q9BSK0 173 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 THAP7Q9BT49 309 aaPredicted RBP15.23■□□□□ 0.03
NUP50-202ENST00000396096 CTSFQ9UBX1 484 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 ARID1BQ8NFD5 2236 aaPredicted RBP15.23■□□□□ 0.03
NUP50-202ENST00000396096 FAM240BA0A1B0GVZ2 78 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 OR6C70A6NIJ9 312 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 NPIPB7O75200 414 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 TRIM3O75382 744 aaPredicted RBP15.23■□□□□ 0.03
NUP50-202ENST00000396096 SLC43A1O75387 559 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 SERPINI2O75830 405 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 RENP00797 406 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 ITPKBP27987 946 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 NR4A2P43354 598 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 ARRB1P49407 418 aaPredicted RBP15.23■□□□□ 0.03
NUP50-202ENST00000396096 P2RX1P51575 399 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 NANOS3P60323 173 aaKnown RBP15.23■□□□□ 0.03
NUP50-202ENST00000396096 TBRG1Q3YBR2 411 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 EEF1A1P5Q5VTE0 462 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 BAIAP2L2Q6UXY1 529 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 LANCL3Q6ZV70 420 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 PRSS58Q8IYP2 241 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 SNX18Q96RF0 628 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 PTDSS2Q9BVG9 487 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 SEMA4CQ9C0C4 833 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 TAS2R5Q9NYW4 299 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 ZNF346Q9UL40 294 aaKnown RBP15.23■□□□□ 0.03
NUP50-202ENST00000396096 N6AMT1Q9Y5N5 214 aa15.23■□□□□ 0.03
NUP50-202ENST00000396096 FAM171A2A8MVW0 826 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 DCTN6O00399 190 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 ADAM10O14672 748 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 PIN1P1O15428 100 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 UPK3AO75631 287 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 ABHD16AO95870 558 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 ANKRD34CP0C6C1 535 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 TFPIP10646 304 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 PSKH1P11801 424 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 EVI2BP34910 448 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 POLR2HP52434 150 aaKnown RBP15.22■□□□□ 0.03
NUP50-202ENST00000396096 DMWDQ09019 674 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 ZNF57Q68EA5 555 aaPredicted RBP15.22■□□□□ 0.03
NUP50-202ENST00000396096 MAMDC2Q7Z304 686 aaPredicted RBP15.22■□□□□ 0.03
NUP50-202ENST00000396096 KANSL1Q7Z3B3 1105 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 OR5H6Q8NGV6 325 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 GPR119Q8TDV5 335 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 ABHD1Q96SE0 405 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 OR2B2Q9GZK3 357 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 HDHD2Q9H0R4 259 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 MRM2Q9UI43 246 aaKnown RBP15.22■□□□□ 0.03
NUP50-202ENST00000396096 SPATA2Q9UM82 520 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 KLHDC2Q9Y2U9 406 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 EXPH5Q8NEV8 1989 aa15.22■□□□□ 0.03
NUP50-202ENST00000396096 A0A1W2PPK0 400 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 TMEM72A0PK05 275 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 HSPB2A8KAH6 182 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 PDCD5O14737 125 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 UBL3O95164 117 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 AHCYP23526 432 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 NKX2-5P52952 324 aaPredicted RBP15.21■□□□□ 0.03
NUP50-202ENST00000396096 HSPB2Q16082 182 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 SGCBQ16585 318 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 FAM220AQ7Z4H9 259 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 MISPQ8IVT2 679 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 OR6V1Q8N148 313 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 RGP1Q92546 391 aaPredicted RBP15.21■□□□□ 0.03
NUP50-202ENST00000396096 MAP6Q96JE9 813 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 ADAD1Q96M93 576 aaKnown RBP15.21■□□□□ 0.03
NUP50-202ENST00000396096 SRA1Q9HD15 236 aaKnown RBP15.21■□□□□ 0.03
NUP50-202ENST00000396096 NOX4Q9NPH5 578 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 NLKQ9UBE8 527 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 RABL2AQ9UBK7 228 aaPredicted RBP15.21■□□□□ 0.03
NUP50-202ENST00000396096 RABL2BQ9UNT1 228 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 TRIOO75962 3097 aa15.21■□□□□ 0.03
NUP50-202ENST00000396096 TMED7-TICAM2A0A0A6YYA0 188 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 C17orf51A8MQB3 221 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 IDSB3KWA1 339 aa15.2■□□□□ 0.02
NUP50-202ENST00000396096 LANCL1O43813 399 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms