RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SIDT1Q9NXL6 827 aaKnown RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 PGAP2Q9UHJ9 254 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 TRAPPC2LQ9UL33 140 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 A8MVM7 634 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 K7EPK0 472 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 YY2O15391 372 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 UTS2O95399 124 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 THBS1P07996 1170 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 FBXO45P0C2W1 286 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 HTR2CP28335 458 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GCAP28676 217 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 HNRNPFP52597 415 aaKnown RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SELPLGQ14242 412 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ATPAF1Q5TC12 328 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 TANGO2Q6ICL3 276 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC48A1Q6P1K1 146 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 FAM57BQ71RH2 274 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 FAM71E2Q8N5Q1 922 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CPEB3Q8NE35 698 aaKnown RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 OR4D6Q8NGJ1 314 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 RHOXF1Q8NHV9 184 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 C19orf43Q9BQ61 176 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 DECR2Q9NUI1 292 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 UGT2A1Q9Y4X1 527 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 A0A1B0GX78 115 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 MEIS3P1A6NDR6 274 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ARPC1BO15143 372 aaKnown RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GMDSO60547 372 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SRMP19623 302 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 TNFSF8P32971 234 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 PXNP49023 591 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 RELAQ04206 551 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 HBMQ6B0K9 141 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC35A4Q96G79 324 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 LIN37Q96GY3 246 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 INSM2Q96T92 566 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 PSD2Q9BQI7 771 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CNTNAP3Q9BZ76 1288 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC25A18Q9H1K4 315 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SIAEQ9HAT2 523 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GJB3O75712 270 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ABLIM3O94929 683 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CD14P08571 375 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SSTR4P31391 388 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC5A2P31639 672 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 MTNR1BP49286 362 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 REEP5Q00765 189 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF91Q05481 1191 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CAMK2BQ13554 666 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 Q499Y3 187 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF534Q76KX8 674 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 PAQR8Q8TEZ7 354 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM106AQ96A25 262 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 PRSS16Q9NQE7 514 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 KIAA1551Q9HCM1 1747 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 A0A1B0GV50 99 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 LRIT2A6NDA9 550 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM221A6NGB7 291 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MC2RQ01718 297 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PLA2G7Q13093 441 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TBC1D28Q2M2D7 210 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZFP90Q8TF47 636 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ANKRD9Q96BM1 317 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 BARHL1Q9BZE3 327 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 OLAHQ9NV23 265 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TNFRSF10CO14798 259 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PRAMEF4O60810 478 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 EVI2BP34910 448 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF93P35789 620 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 CLDN17P56750 224 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SPOCK1Q08629 439 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SQSTM1Q13501 440 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM176BQ3YBM2 270 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 CYP4V2Q6ZWL3 525 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SMAP2Q8WU79 429 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 GGHQ92820 318 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 HAO2Q9NYQ3 351 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 TSTD3H0UI37 97 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RGS11O94810 467 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 UBL3O95164 117 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 FCGR2AP12318 317 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PVRP15151 417 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MCCD1P59942 119 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PFN3P60673 137 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 SLC14A1Q13336 389 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 BRICD5Q6PL45 260 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RBMS3Q6XE24 437 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 C12orf45Q8N5I9 185 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 MRPL38Q96DV4 380 aaKnown RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 CPPED1Q9BRF8 314 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 NMNAT2Q9BZQ4 307 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ZBP1Q9H171 429 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 GLIPR2Q9H4G4 154 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 ATP13A2Q9NQ11 1180 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 PSORS1C1Q9UIG5 152 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RP1L1Q8IWN7 2480 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 COL22A1Q8NFW1 1626 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-204ENST00000395898 AP1G1O43747 822 aa5.05□□□□□ -1.6
VPS13C-204ENST00000395898 RAD1O60671 282 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms