RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 UBTFL6P0CB48 400 aaPredicted RBP11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 IGHV4-38-2P0DP08 117 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF14P17017 642 aaPredicted RBP11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 PRKAA2P54646 552 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 ARF1P84077 181 aaKnown RBP11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 GUCY1A3Q02108 690 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 NPRL3Q12980 569 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 CCDC153Q494R4 210 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 SPDYAQ5MJ70 313 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 HHATQ5VTY9 493 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 CREB3L2Q70SY1 520 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 EPHX4Q8IUS5 362 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 MRAPQ8TCY5 172 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 RAB8BQ92930 207 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 KTI12Q96EK9 354 aaPredicted RBP11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 FCRL1Q96LA6 429 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 TMEM237Q96Q45 408 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 REEP4Q9H6H4 257 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 ZCCHC3Q9NUD5 404 aaKnown RBP11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 KLHL21Q9UJP4 597 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF346Q9UL40 294 aaKnown RBP11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 PCDHGB4Q9UN71 923 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 STK38LQ9Y2H1 464 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 HOXA3O43365 443 aaPredicted RBP11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 FCMRO60667 390 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 SKAP2O75563 359 aaPredicted RBP11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 CYP7B1O75881 506 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF432O94892 652 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 MTNR1AP48039 350 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 GYS2P54840 703 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 CCL8P80075 99 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 MAPK14Q16539 360 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 GLB1L3Q8NCI6 653 aaPredicted RBP11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF837Q96EG3 531 aaPredicted RBP11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 METTL2AQ96IZ6 378 aaKnown RBP11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 OSGIN1Q9UJX0 560 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 FZR1Q9UM11 496 aa11.57□□□□□ -0.56
VCPKMT-201ENST00000395859 IGLV3-9A0A075B6K5 115 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 TMED7-TICAM2A0A0A6YYA0 188 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 IGHV1-69-2A0A0G2JMI3 117 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 MDFIC2A0A1B0GVS7 189 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 LIPT2A6NK58 231 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 SRRM5B3KS81 715 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 CLDN25C9JDP6 229 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 FOXH1O75593 365 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 KRT33AO76009 404 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 SUPT7LO94864 414 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 AKR7A3O95154 331 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 GPANK1O95872 356 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 PPIAL4GP0DN37 164 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 EFNA1P20827 205 aaPredicted RBP11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 PRPH2P23942 346 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 ETV4P43268 484 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 RAD52P43351 418 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 PKNOX1P55347 436 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 ROR2Q01974 943 aaKnown RBP11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 PAX8Q06710 450 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 FAM189A2Q15884 450 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 PCGF3Q3KNV8 242 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 GKAP1Q5VSY0 366 aaPredicted RBP11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 C11orf87Q6NUJ2 197 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 EIF3MQ7L2H7 374 aaKnown RBP11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 JAZF1Q86VZ6 243 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 SLC22A9Q8IVM8 553 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 CCDC36Q8IYA8 594 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 KIRREL3Q8IZU9 778 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 LINC01006Q8NI28 216 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 BCAS4Q8TDM0 211 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 TCP10LQ8TDR4 215 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 ADAMTS15Q8TE58 950 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 PMM1Q92871 262 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 PPCDCQ96CD2 204 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 GATA5Q9BWX5 397 aaPredicted RBP11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 MS4A7Q9GZW8 240 aaPredicted RBP11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 TENM2Q9NT68 2774 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 TMED7Q9Y3B3 224 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 RNF114Q9Y508 228 aa11.56□□□□□ -0.56
VCPKMT-201ENST00000395859 A0A1W2PPM1 405 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 NDUFAB1O14561 156 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 IGHMP01871 453 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 IMPDH1P20839 514 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 ATP5F1P24539 256 aaPredicted RBP11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 NAA20P61599 178 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 LCP2Q13094 533 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 ATG16L1Q676U5 607 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 FIP1L1Q6UN15 594 aaKnown RBP11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 OLIG3Q7RTU3 272 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 CPLX4Q7Z7G2 160 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 C4orf33Q8N1A6 199 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 LRRC8CQ8TDW0 803 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 GTF3AQ92664 365 aaKnown RBP11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 DDIT4LQ96D03 193 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 OR7D2Q96RA2 312 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 SIKE1Q9BRV8 207 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF350Q9GZX5 532 aa11.55□□□□□ -0.56
VCPKMT-201ENST00000395859 HINT3Q9NQE9 182 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms