RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CHCHD2Q9Y6H1 151 aaPredicted RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 ZNF292O60281 2723 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 E9PI62 339 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 PSMD9O00233 223 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 CCRL2O00421 344 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 TBX1O43435 398 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 FBXO45P0C2W1 286 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 ZNF3P17036 446 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 RPS27P42677 84 aaKnown RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 RPS25P62851 125 aaKnown RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 AGAP6Q5VW22 663 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 LEG1Q6P5S2 330 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 GDPD3Q7L5L3 318 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 KLBQ86Z14 1044 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 WDSUB1Q8N9V3 476 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 ZNF485Q8NCK3 441 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 FAM83FQ8NEG4 500 aaPredicted RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 OR8K3Q8NH51 312 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 RFKQ969G6 155 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 ZHX1-C8orf76Q96EF9 292 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 AGAP4Q96P64 663 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 TSPAN32Q96QS1 320 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 DDOQ99489 341 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 ADGRL4Q9HBW9 690 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 SRA1Q9HD15 236 aaKnown RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 RPRD1BQ9NQG5 326 aaKnown RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 PPP4R1LQ9P1A2 415 aa13.53□□□□□ -0.24
MKS1-202ENST00000393119 FARSAQ9Y285 508 aaKnown RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 RPH3AQ9Y2J0 694 aaPredicted RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
MKS1-202ENST00000393119 TNFSF15O95150 251 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 TFP02787 698 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 KLK2P20151 261 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 UQCRC1P31930 480 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 ETV6P41212 452 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 WNT4P56705 351 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 C17orf67Q0P5P2 114 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 GLYR1Q49A26 553 aaPredicted RBP13.52□□□□□ -0.24
MKS1-202ENST00000393119 SMUG1Q53HV7 270 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 RPL13AP3Q6NVV1 102 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 RPTNQ6XPR3 784 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 DPY19L2P2Q6ZN68 376 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 FAM122BQ7Z309 247 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 LSM14AQ8ND56 463 aaKnown RBP13.52□□□□□ -0.24
MKS1-202ENST00000393119 C7orf57Q8NEG2 295 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 POC1BQ8TC44 478 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 IL17BQ9UHF5 180 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 HIF3AQ9Y2N7 669 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 N6AMT1Q9Y5N5 214 aa13.52□□□□□ -0.24
MKS1-202ENST00000393119 LOC101059948A0A1B0GTJ6 334 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 SELENOFO60613 162 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 SLC25A12O75746 678 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 SNX4O95219 450 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 LCN1P31025 176 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 CRYBB2P43320 205 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 POLR2HP52434 150 aaKnown RBP13.52□□□□□ -0.25
MKS1-202ENST00000393119 TGIF1Q15583 401 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 NTRK2Q16620 822 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 C1orf140Q5VVS0 124 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 C19orf48Q6RUI8 117 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 NDUFAF7Q7L592 441 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 NUP54Q7Z3B4 507 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 GRINAQ7Z429 371 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 ZNF511Q8NB15 262 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 GNRHR2Q96P88 292 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 SLC19A3Q9BZV2 496 aa13.52□□□□□ -0.25
MKS1-202ENST00000393119 A0A0G2JMM0 328 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 A0A1W2PPB8 328 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 A0A1W2PQL4 384 aaPredicted RBP13.51□□□□□ -0.25
MKS1-202ENST00000393119 A0A1W2PRS3 328 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 KIR3DP1A8MWS1 328 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 NPIPB7O75200 414 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
MKS1-202ENST00000393119 SHC1P29353 583 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 ZNF45Q02386 682 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 MESTQ5EB52 335 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 ARHGAP11AQ6P4F7 1023 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 CCBE1Q6UXH8 406 aaPredicted RBP13.51□□□□□ -0.25
MKS1-202ENST00000393119 SYT14Q8NB59 555 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 OR6K6Q8NGW6 343 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 SLC22A8Q8TCC7 542 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 SMPDL3BQ92485 455 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 JSRP1Q96MG2 331 aaPredicted RBP13.51□□□□□ -0.25
MKS1-202ENST00000393119 PROK2Q9HC23 129 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 GRIP1Q9Y3R0 1128 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 WIF1Q9Y5W5 379 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 EXPH5Q8NEV8 1989 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 TRAV36DV7A0A075B6V5 113 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 ANKUB1A6NFN9 424 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 SNTNA6NMZ2 147 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 IGHA1P01876 353 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 DLSTP36957 453 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 ZNF85Q03923 595 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 MXD1Q05195 221 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 RUNX1T1Q06455 604 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 SNTA1Q13424 505 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 MELKQ14680 651 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 ATP1A1-AS1Q5TC04 95 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 RPS19BP1Q86WX3 136 aaKnown RBP13.51□□□□□ -0.25
MKS1-202ENST00000393119 ZNF417Q8TAU3 575 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms