RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 DYRK1AQ13627 763 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 DEFB133Q30KQ1 61 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 NHLRC1Q6VVB1 395 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 TSTD1Q8NFU3 115 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 OR52B4Q8NGK2 314 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 OR2T27Q8NH04 317 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 ZNF426Q9BUY5 554 aa14.86□□□□□ -0.03
NKX3-1-201ENST00000380871 CCDC85CA6NKD9 419 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 KHNYNO15037 678 aaKnown RBP14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 KHDRBS3O75525 346 aaKnown RBP14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 PSMB1P20618 241 aaKnown RBP14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 ERVK-25P63136 954 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 PSG6Q00889 435 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 CCINQ13939 588 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 KCNAB1Q14722 419 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 PRAMEF17Q5VTA0 474 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 SEZ6L2Q6UXD5 910 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 ANKRD9Q96BM1 317 aaPredicted RBP14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 SLC38A3Q99624 504 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 MGAT4CQ9UBM8 478 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 ZNF69Q9UC07 566 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 PCDHGA5Q9Y5G8 931 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 CXCL2P19875 107 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 DPP4P27487 766 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 MAP3K8P41279 467 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 SOX2P48431 317 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 GFERP55789 205 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 OC90Q02509 493 aaPredicted RBP14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 LINC00303Q3SY05 128 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 CLLU1Q5K131 121 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 OTPQ5XKR4 325 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 OVCH1Q7RTY7 1134 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 ZNF511Q8NB15 262 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 SLC2A12Q8TD20 617 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 ASB12Q8WXK4 309 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 LRRC61Q9BV99 259 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 LMAN1LQ9HAT1 526 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 NPTNQ9Y639 398 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 WDR87Q6ZQQ6 2873 aa14.85□□□□□ -0.03
NKX3-1-201ENST00000380871 POM121CA8CG34 1229 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 HOXC4P09017 264 aaPredicted RBP14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 PRKACBP22694 351 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 PTH2RP49190 550 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 ACTA2P62736 377 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 ACTG2P63267 376 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 POU4F2Q12837 409 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 MFSD13AQ14CX5 517 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 NPEPL1Q8NDH3 523 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 RIT1Q92963 219 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 RNF166Q96A37 237 aaPredicted RBP14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 STACQ99469 402 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 NKX3-1Q99801 234 aaPredicted RBP14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 PIPOXQ9P0Z9 390 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 SERTAD3Q9UJW9 196 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 SPI1P17947 270 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 RPS27P42677 84 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 UBE2IP63279 158 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 PON3Q15166 354 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 ODF4Q2M2E3 257 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 SFRP5Q5T4F7 317 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 RPL22L1Q6P5R6 122 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 SLITRK4Q8IW52 837 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 SYNPRQ8TBG9 265 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 ELMOD3Q96FG2 381 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 PTTG3PQ9NZH4 202 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 ERVK-19Q9WJR5 959 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 KLHDC2Q9Y2U9 406 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 ENTPD2Q9Y5L3 495 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 HS3ST3A1Q9Y663 406 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 SPAG17Q6Q759 2223 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 A0A1W2PPL8 197 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 UBE2MP61081 183 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 SYS1Q8N2H4 156 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 SPERTQ8NA61 448 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 LMF1Q96S06 567 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 OR5V1Q9UGF6 321 aa14.84□□□□□ -0.03
NKX3-1-201ENST00000380871 NDUFB2O95178 105 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 OR8G3PP0DMU2 310 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 M6PRP20645 277 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 CDK2P24941 298 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 RAG2P55895 527 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 OR5M10Q6IEU7 315 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 CDH24Q86UP0 819 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 OR14A16Q8NHC5 309 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 NOX3Q9HBY0 568 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 LRIT1Q9P2V4 623 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 RNF215Q9Y6U7 377 aa14.83□□□□□ -0.03
NKX3-1-201ENST00000380871 UNC13CQ8NB66 2214 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 A0A087WV62 115 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 KIR2DS5A0A0G2JLQ3 304 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 A0A0G2JNG1 304 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 ZNF879B4DU55 563 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 TGFBR3LH3BV60 316 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 KIR2DS3K7RE56 304 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 AIPO00170 330 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 CTDSPLO15194 276 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 RRASP10301 218 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 KIR2DS5Q14953 304 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 OR8K3Q8NH51 312 aa14.83□□□□□ -0.04
NKX3-1-201ENST00000380871 MOSPD2Q8NHP6 518 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms