RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ZCCHC23Q6ZST2 131 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 C10orf107Q8IVU9 208 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 CMIPQ8IY22 773 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 GPR137CQ8N3F9 429 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 CCDC63Q8NA47 563 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 OR4A15Q8NGL6 344 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 C3orf30Q96M34 536 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 ZNF75AQ96N20 296 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 ZMAT3Q9HA38 289 aaKnown RBP14.78□□□□□ -0.04
HMGN1-203ENST00000380748 PSMC3IPQ9P2W1 217 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-203ENST00000380748 ZNF69Q9UC07 566 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 RCE1Q9Y256 329 aa14.78□□□□□ -0.04
HMGN1-203ENST00000380748 AGAP5A6NIR3 686 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 A8MVM7 634 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 C1QCP02747 245 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 RNASE1P07998 156 aaKnown RBP14.77□□□□□ -0.05
HMGN1-203ENST00000380748 RPS23P62266 143 aaKnown RBP14.77□□□□□ -0.05
HMGN1-203ENST00000380748 LCN2P80188 198 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 PIGFQ07326 219 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 SRSF4Q08170 494 aaKnown RBP14.77□□□□□ -0.05
HMGN1-203ENST00000380748 BAMBIQ13145 260 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 GSG1Q2KHT4 349 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 C6orf136Q5SQH8 315 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 MRPL2Q5T653 305 aaKnown RBP14.77□□□□□ -0.05
HMGN1-203ENST00000380748 CCDC36Q8IYA8 594 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 BCL6BQ8N143 479 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-203ENST00000380748 ANKFN1Q8N957 763 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 FNDC5Q8NAU1 212 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 AGR3Q8TD06 166 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF48Q96MX3 618 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-203ENST00000380748 SLC38A1Q9H2H9 487 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 SEC14L4Q9UDX3 406 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF346Q9UL40 294 aaKnown RBP14.77□□□□□ -0.05
HMGN1-203ENST00000380748 WIPI2Q9Y4P8 454 aa14.77□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF99A8MXY4 864 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-203ENST00000380748 GKN3PP0CG01 181 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 PNMTP11086 282 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 G6PDP11413 515 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 UQCRBP14927 111 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 GCH1P30793 250 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 CASQ1P31415 396 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 RAD52P43351 418 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 GALK2Q01415 458 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 SYPL1Q16563 259 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 GSTA3Q16772 222 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 NKPD1Q17RQ9 610 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 PHYHD1Q5SRE7 291 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 ANKRD46Q86W74 232 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 WDFY1Q8IWB7 410 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 CADM2Q8N3J6 435 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 SYT14Q8NB59 555 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 RLIMQ9NVW2 624 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 PDP1Q9P0J1 537 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-203ENST00000380748 B3GAT1Q9P2W7 334 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 CACNG2Q9Y698 323 aa14.76□□□□□ -0.05
HMGN1-203ENST00000380748 C17orf100A8MU93 164 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 RNASET2O00584 256 aaKnown RBP14.75□□□□□ -0.05
HMGN1-203ENST00000380748 NPIPB7O75200 414 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 CLPTM1O96005 669 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 FGF4P08620 206 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 TFPTP0C1Z6 253 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF43P17038 809 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 RPS4Y1P22090 263 aaKnown RBP14.75□□□□□ -0.05
HMGN1-203ENST00000380748 PCLAFQ15004 111 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 SAXO2Q658L1 398 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 SLC25A28Q96A46 364 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 SLC25A36Q96CQ1 311 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 TSPAN32Q96QS1 320 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 OR2M2Q96R28 347 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 HINT3Q9NQE9 182 aaKnown RBP14.75□□□□□ -0.05
HMGN1-203ENST00000380748 TAAR3PQ9P1P4 343 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 NUP50Q9UKX7 468 aa14.75□□□□□ -0.05
HMGN1-203ENST00000380748 DSPPQ9NZW4 1301 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 IGHV1-69-2A0A0G2JMI3 117 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 CLDN25C9JDP6 229 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 FTCDNL1E5RQL4 147 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 M0R3G1 203 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 HMGN4O00479 90 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 RIPK2O43353 540 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 UQCRC2P22695 453 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 OMGP23515 440 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 CRYBB2P43320 205 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 PTDSS1P48651 473 aaKnown RBP14.74□□□□□ -0.05
HMGN1-203ENST00000380748 SLC9A3R2Q15599 337 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 CHI3L2Q15782 390 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 ARMCX4Q5H9R4 360 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 KLF17Q5JT82 389 aaPredicted RBP14.74□□□□□ -0.05
HMGN1-203ENST00000380748 TMEM123Q8N131 208 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 DEFB108BQ8NET1 73 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 MGARPQ8TDB4 240 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 NEURL3Q96EH8 262 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 PTDSS2Q9BVG9 487 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 ZNF224Q9NZL3 707 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 RYR3Q15413 4870 aa14.74□□□□□ -0.05
HMGN1-203ENST00000380748 CPSF4O95639 269 aaKnown RBP14.73□□□□□ -0.05
HMGN1-203ENST00000380748 IL7RP16871 459 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 CRHR1P34998 444 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 ACAA2P42765 397 aaKnown RBP14.73□□□□□ -0.05
HMGN1-203ENST00000380748 GIPRP48546 466 aa14.73□□□□□ -0.05
HMGN1-203ENST00000380748 AQP5P55064 265 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms